RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PSMD3O43242 534 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 RALBP11234 206 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 PNPLA4P41247 253 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 PMS2P54278 862 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 CCDC15Q0P6D6 951 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 SLC26A7Q8TE54 656 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 CNTNAP5Q8WYK1 1306 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 LUC7L3O95232 432 aaKnown RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 SYF2O95926 243 aaKnown RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 NCAM1P13591 858 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 RBBP7Q16576 425 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 GRID2IPA4D2P6 1211 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 SH3BGRP55822 239 aaPredicted RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 IZUMO3Q5VZ72 239 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 TBC1D19Q8N5T2 526 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 FBXO41Q8TF61 875 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 SCFD1Q8WVM8 642 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 GPRASP2Q96D09 838 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 INO80Q9ULG1 1556 aaPredicted RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 CFAP69A5D8W1 941 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 NDUFS3O75489 264 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 ODC1P11926 461 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 UCHL3P15374 230 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 CPS1P31327 1500 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 LAMB3Q13751 1172 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 METTL16Q86W50 562 aaKnown RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 TAF1DQ9H5J8 278 aaPredicted RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 RAB6BQ9NRW1 208 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 HLA-DRAP01903 254 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 SRGNP10124 158 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 NPEPPSP55786 919 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 P3H1Q32P28 736 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 C10orf120Q5SQS8 335 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 NUDCD3Q8IVD9 361 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 ELAC2Q9BQ52 826 aaKnown RBP14.15□□□□□ -0.14
TRAF3-208ENST00000560371 ASPSCR1Q9BZE9 553 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 CASS4Q9NQ75 786 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 KLHL11Q9NVR0 708 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 THEGQ9P2T0 379 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 FAM187AA6NFU0 413 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 MDM2Q00987 491 aaPredicted RBP14.15□□□□□ -0.14
TRAF3-208ENST00000560371 EDRF1Q3B7T1 1238 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 NBPF9Q3BBW0 867 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 ACER1Q8TDN7 264 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 OPTNQ96CV9 577 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 GYG2O15488 501 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 TRPA1O75762 1119 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 RHOBTB3O94955 611 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 ARL4DP49703 201 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 SLC18A3Q16572 532 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 CATSPER3Q86XQ3 398 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 ATL2Q8NHH9 583 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 DPF3Q92784 378 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 UVRAGQ9P2Y5 699 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 FAM47EQ6ZV65 393 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 KLK14Q9P0G3 267 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 SLC30A1Q9Y6M5 507 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 NCK2O43639 380 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 PGK2P07205 417 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRAF3-208ENST00000560371 DHX34Q14147 1143 aaKnown RBP14.15□□□□□ -0.14
TRAF3-208ENST00000560371 TDRD10Q5VZ19 366 aaKnown RBP14.15□□□□□ -0.14
TRAF3-208ENST00000560371 TRAPPC11Q7Z392 1133 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 LATS2Q9NRM7 1088 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 MAD2L2Q9UI95 211 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 HIST1H2AGP0C0S8 130 aaPredicted RBP14.15□□□□□ -0.14
TRAF3-208ENST00000560371 HIST1H2ADP20671 130 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 SYTL3Q4VX76 610 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 PDXDC1Q6P996 788 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 HIST1H2AHQ96KK5 128 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 HIST1H2AJQ99878 128 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 H2AFJQ9BTM1 129 aa14.15□□□□□ -0.14
TRAF3-208ENST00000560371 TAF6P49848 677 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 MMS22LQ6ZRQ5 1243 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 PIP4K2CQ8TBX8 421 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 PITPNM2Q9BZ72 1349 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 ITGB3P05106 788 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 KLRK1P26718 216 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 CLCN6P51797 869 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 DDIASQ8IXT1 998 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 PPP1R2P1Q96PQ5 205 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 UNC45AQ9H3U1 944 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 TUBE1Q9UJT0 475 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 SUPT20HL2P0C7V6 817 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 NFIAQ12857 509 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 EFTUD2Q15029 972 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRAF3-208ENST00000560371 EFHC1Q5JVL4 640 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 HIPK4Q8NE63 616 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 SLC35G2Q8TBE7 412 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 ENTPD7Q9NQZ7 604 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 ARHGAP10A1A4S6 786 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 SERPIND1P05546 499 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 MAGOHP61326 146 aaKnown RBP14.14□□□□□ -0.15
TRAF3-208ENST00000560371 UBE2Q2Q8WVN8 375 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 PPP2R3BQ9Y5P8 575 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 STK4Q13043 487 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 PDAP1Q13442 181 aaKnown RBP14.14□□□□□ -0.15
TRAF3-208ENST00000560371 BFSP2Q13515 415 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 SLC9A5Q14940 896 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms