RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.77□□□□□ -1.65
LRRC28-218ENST00000560236 MYADML2A6NDP7 307 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 MGST3O14880 152 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 CDC45O75419 566 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 MATN4O95460 622 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 POMCP01189 267 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 ENPP1P22413 925 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 FGFR4P22455 802 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 ECHS1P30084 290 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 NHLH1Q02575 133 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 SP140Q13342 867 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 DALRD3Q5D0E6 543 aaKnown RBP4.77□□□□□ -1.65
LRRC28-218ENST00000560236 AFMIDQ63HM1 303 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 FAM180AQ6UWF9 173 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 Q6ZVL8 140 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 BOD1Q96IK1 185 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 ACAP3Q96P50 834 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 UHRF1Q96T88 793 aaPredicted RBP4.77□□□□□ -1.65
LRRC28-218ENST00000560236 FEZ1Q99689 392 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 AIFM2Q9BRQ8 373 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 TMEM74BQ9NUR3 256 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 MOCS1Q9NZB8 636 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 CDC42BPBQ9Y5S2 1711 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 KIF14Q15058 1648 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 WNT10BO00744 389 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 GPANK1O95872 356 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 ERBB2P04626 1255 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 RAP2AP10114 183 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 IL2RBP14784 551 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 ATP5JP18859 108 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 CACNA2D1P54289 1103 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 PER3P56645 1201 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 CCT2P78371 535 aaKnown RBP4.76□□□□□ -1.65
LRRC28-218ENST00000560236 HSD11B2P80365 405 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 UBXN2BQ14CS0 331 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 GJC2Q5T442 439 aaPredicted RBP4.76□□□□□ -1.65
LRRC28-218ENST00000560236 FOXR2Q6PJQ5 311 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 ACTRT2Q8TDY3 377 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 USP7Q93009 1102 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 FOXJ2Q9P0K8 574 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 KCNE5Q9UJ90 142 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 DMTF1Q9Y222 760 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 AATKQ6ZMQ8 1374 aa4.76□□□□□ -1.65
LRRC28-218ENST00000560236 LRP5O75197 1615 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 NPHP4O75161 1426 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-218ENST00000560236 LRRC3CA6NJW4 275 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 GSG1L2A8MUP6 293 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 RBMXL2O75526 392 aaKnown RBP4.75□□□□□ -1.65
LRRC28-218ENST00000560236 C1QL1O75973 258 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 GCSHP23434 173 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 SESN3P58005 492 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 THNSL2Q86YJ6 484 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 PQLC1Q8N2U9 271 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 STON2Q8WXE9 905 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 NACC2Q96BF6 587 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 PTCD3Q96EY7 689 aaKnown RBP4.75□□□□□ -1.65
LRRC28-218ENST00000560236 PDLIM2Q96JY6 352 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 MTO1Q9Y2Z2 717 aaKnown RBP4.75□□□□□ -1.65
LRRC28-218ENST00000560236 ZC3H13Q5T200 1668 aaKnown RBP4.75□□□□□ -1.65
LRRC28-218ENST00000560236 LRRC9Q6ZRR7 1453 aa4.75□□□□□ -1.65
LRRC28-218ENST00000560236 SHPRHQ149N8 1683 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 KDM5DQ9BY66 1539 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 BPIP17213 487 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 SLC6A2P23975 617 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 SREBF1P36956 1147 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 FOXF2Q12947 444 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 ADRM1Q16186 407 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 CYP2A13Q16696 494 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 ZNF529Q6P280 563 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 SRRM1Q8IYB3 904 aaKnown RBP4.74□□□□□ -1.65
LRRC28-218ENST00000560236 AFAP1Q8N556 730 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 CLRN3Q8NCR9 226 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 TSPEARQ8WU66 669 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 AUTS2Q8WXX7 1259 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 UBXN4Q92575 508 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 FATE1Q969F0 183 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 DRC1Q96MC2 740 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 HEPHQ9BQS7 1158 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 SENP6Q9GZR1 1112 aaPredicted RBP4.74□□□□□ -1.65
LRRC28-218ENST00000560236 KLK15Q9H2R5 256 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 FAM30AQ9NZY2 134 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 SLC17A6Q9P2U8 582 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 USP25Q9UHP3 1055 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 SIK3Q9Y2K2 1263 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.74□□□□□ -1.65
LRRC28-218ENST00000560236 JCADQ9P266 1359 aa4.74□□□□□ -1.65
LRRC28-218ENST00000560236 COL11A2P13942 1736 aaPredicted RBP4.74□□□□□ -1.65
LRRC28-218ENST00000560236 ADGBQ8N7X0 1667 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 ARHGAP5Q13017 1502 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 CCDC78A2IDD5 438 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 NEMP1O14524 444 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 PDE8AO60658 829 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 ULK1O75385 1050 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 ERN1O75460 977 aaKnown RBP4.73□□□□□ -1.65
LRRC28-218ENST00000560236 PRSS23O95084 383 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 MYCLP1P12525 358 aaPredicted RBP4.73□□□□□ -1.65
LRRC28-218ENST00000560236 ABCG1P45844 678 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 ALDH1A3P47895 512 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 VAV2P52735 878 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 MRPS9P82933 396 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms