RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 CCDC150Q8NCX0 1101 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 MICAL1Q8TDZ2 1067 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 CCDC127Q96BQ5 260 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 CDX2Q99626 313 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 EMILIN2Q9BXX0 1053 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 DNAI2Q9GZS0 605 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 FAM124BQ9H5Z6 455 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 NSUN3Q9H649 340 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 CERS4Q9HA82 394 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 ALG13Q9NP73 1137 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 ENTPD7Q9NQZ7 604 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 CHST7Q9NS84 486 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 MARCH5Q9NX47 278 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 TMEM63CQ9P1W3 806 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 CTNND2Q9UQB3 1225 aa13.01□□□□□ -0.33
RABGGTA-215ENST00000560207 NT5C1B-RDH14C9J2C7 533 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 H7C4K7 107 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 M0QZQ0 153 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 GRM6O15303 877 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 PMM2O15305 246 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 P4HA2O15460 535 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 MEFVO15553 781 aaPredicted RBP13□□□□□ -0.33
RABGGTA-215ENST00000560207 PHACTR2O75167 634 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 KIF4AO95239 1232 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 P4HA1P13674 534 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 FOSL2P15408 326 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 TYMPP19971 482 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 AARSP49588 968 aaKnown RBP eCLIP13□□□□□ -0.33
RABGGTA-215ENST00000560207 CASP4P49662 377 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 LILRA4P59901 499 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 DSG1Q02413 1049 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 SOX4Q06945 474 aaPredicted RBP13□□□□□ -0.33
RABGGTA-215ENST00000560207 DPCR1Q3MIW9 517 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 CCDC40Q4G0X9 1142 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 EFCAB13Q8IY85 973 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 MRPL43Q8N983 215 aaKnown RBP13□□□□□ -0.33
RABGGTA-215ENST00000560207 ANKRD20A12PQ8NF67 263 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 ENOX1Q8TC92 643 aaKnown RBP13□□□□□ -0.33
RABGGTA-215ENST00000560207 C18orf25Q96B23 403 aaPredicted RBP13□□□□□ -0.33
RABGGTA-215ENST00000560207 SUSD3Q96L08 255 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 TCF25Q9BQ70 676 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 TTPALQ9BTX7 342 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 IMPG2Q9BZV3 1241 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 ZBP1Q9H171 429 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 THAP9Q9H5L6 903 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 FNIP2Q9P278 1114 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 MAGEC2Q9UBF1 373 aaPredicted RBP13□□□□□ -0.33
RABGGTA-215ENST00000560207 MAFFQ9ULX9 164 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 LAMA2P24043 3122 aaKnown RBP13□□□□□ -0.33
RABGGTA-215ENST00000560207 TRANK1O15050 2925 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 VWA8A3KMH1 1905 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 ATG2AQ2TAZ0 1938 aa13□□□□□ -0.33
RABGGTA-215ENST00000560207 KPNA7A9QM74 516 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 FSCN2O14926 492 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 B4GALT3O60512 393 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 CXCL14O95715 111 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 ODC1P11926 461 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 TRIM21P19474 475 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 FGFR3P22607 806 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 IGFBP4P22692 258 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 NFKBIBQ15653 356 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 SGSM1Q2NKQ1 1148 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 ZACNQ401N2 412 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 FAM171A1Q5VUB5 890 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 KRT39Q6A163 491 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 DSTYKQ6XUX3 929 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 RTL10Q7L3V2 364 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 METTL23Q86XA0 190 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 TMEM86AQ8N2M4 240 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 TTC39CQ8N584 583 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 C1orf127Q8N9H9 656 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 GDPD5Q8WTR4 605 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 PIK3R5Q8WYR1 880 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 BORCS6Q96GS4 357 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 DUSP9Q99956 384 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 BPIFA3Q9BQP9 254 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 SRRTQ9BXP5 876 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 MTMR12Q9C0I1 747 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 VRTNQ9H8Y1 702 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 TMEM8AQ9HCN3 771 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 GDAP2Q9NXN4 497 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 HCSTQ9UBK5 93 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 TUBGCP4Q9UGJ1 667 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 AGAP1Q9UPQ3 857 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 STXBP5LQ9Y2K9 1186 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 BACE2Q9Y5Z0 518 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 MTCH2Q9Y6C9 303 aa12.99□□□□□ -0.33
RABGGTA-215ENST00000560207 CHD9Q3L8U1 2897 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 TRIM49BA6NDI0 452 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 LRRIQ3A6PVS8 624 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 SMTNL1A8MU46 457 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 HUS1O60921 280 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 C4BPAP04003 597 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 ITGB3P05106 788 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 ADH1AP07327 375 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 TPM2P07951 284 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms