RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 FBXL5Q9UKA1 691 aa13.68□□□□□ -0.22
SNX1-209ENST00000559961 EXOC7Q9UPT5 735 aa13.68□□□□□ -0.22
SNX1-209ENST00000559961 MRPS17Q9Y2R5 130 aaKnown RBP13.68□□□□□ -0.22
SNX1-209ENST00000559961 PI15O43692 258 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 ABLIM3O94929 683 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 NPR3P17342 541 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 PLCG1P19174 1290 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 NBL1P41271 181 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 ALDH1A3P47895 512 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 GPC5P78333 572 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 PRKCQQ04759 706 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 ADCY1Q08828 1119 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 POSTNQ15063 836 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 ARSHQ5FYA8 562 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 RRAGBQ5VZM2 374 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 CWF19L1Q69YN2 538 aaKnown RBP13.67□□□□□ -0.22
SNX1-209ENST00000559961 ZC3H14Q6PJT7 736 aaKnown RBP13.67□□□□□ -0.22
SNX1-209ENST00000559961 SV2BQ7L1I2 683 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 METTL23Q86XA0 190 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 ITFG1Q8TB96 612 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 ING5Q8WYH8 240 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 FGF14Q92915 247 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 NELL2Q99435 816 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 BCO2Q9BYV7 579 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 SEMA4AQ9H3S1 761 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 HCFC1R1Q9NWW0 138 aa13.67□□□□□ -0.22
SNX1-209ENST00000559961 AFF4Q9UHB7 1163 aaKnown RBP13.67□□□□□ -0.22
SNX1-209ENST00000559961 WDR27A2RRH5 827 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 KRBA1A5PL33 1030 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 OR6C75A6NL08 312 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 LACTBL1A8MY62 500 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 PROB1E7EW31 1015 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 ABLIM1O14639 778 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 ECI2O75521 394 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
SNX1-209ENST00000559961 ODC1P11926 461 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 EPHB3P54753 998 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 SPAG1Q07617 926 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 SNW1Q13573 536 aaKnown RBP13.66□□□□□ -0.22
SNX1-209ENST00000559961 SLC44A4Q53GD3 710 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 ADALQ6DHV7 355 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 CD300LGQ6UXG3 332 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 RSPO2Q6UXX9 243 aaPredicted RBP13.66□□□□□ -0.22
SNX1-209ENST00000559961 KXD1Q9BQD3 176 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 CCSER1Q9C0I3 900 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 GPR88Q9GZN0 384 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 SLITRK6Q9H5Y7 841 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 ZFP14Q9HCL3 533 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 AVENQ9NQS1 362 aaPredicted RBP13.66□□□□□ -0.22
SNX1-209ENST00000559961 ASAH2Q9NR71 780 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 STK17AQ9UEE5 414 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 TUBGCP4Q9UGJ1 667 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 DSEQ9UL01 958 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 R3HCC1Q9Y3T6 440 aaKnown RBP13.66□□□□□ -0.22
SNX1-209ENST00000559961 INSL5Q9Y5Q6 135 aa13.66□□□□□ -0.22
SNX1-209ENST00000559961 KANSL1LA0AUZ9 987 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 TTC26A0AVF1 554 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 MICAL2O94851 1124 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 GAP43P17677 238 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 LRPAP1P30533 357 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 MAGEA9P43362 315 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 TWF1Q12792 350 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 MRPL58Q14197 206 aaKnown RBP13.65□□□□□ -0.22
SNX1-209ENST00000559961 TMEM132DQ14C87 1099 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 UBXN2BQ14CS0 331 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 MLF2Q15773 248 aaPredicted RBP13.65□□□□□ -0.22
SNX1-209ENST00000559961 TAF12Q16514 161 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 OVOS1Q6IE37 1185 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 CCDC73Q6ZRK6 1079 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 FRMD5Q7Z6J6 570 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 NPAS3Q8IXF0 933 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 YAF2Q8IY57 180 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 THEM5Q8N1Q8 247 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 ST13P5Q8NFI4 369 aaPredicted RBP13.65□□□□□ -0.22
SNX1-209ENST00000559961 HVCN1Q96D96 273 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 LRRC27Q9C0I9 530 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 MRPL44Q9H9J2 332 aaKnown RBP13.65□□□□□ -0.22
SNX1-209ENST00000559961 SEL1LQ9UBV2 794 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 DERAQ9Y315 318 aa13.65□□□□□ -0.22
SNX1-209ENST00000559961 M0QZQ0 153 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 OAZ2O95190 189 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 FGF19O95750 216 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 PIGRP01833 764 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 DCNP07585 359 aaKnown RBP13.64□□□□□ -0.23
SNX1-209ENST00000559961 MYL4P12829 197 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 IGFBP6P24592 240 aaPredicted RBP13.64□□□□□ -0.23
SNX1-209ENST00000559961 ZNF131P52739 623 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 STARD6P59095 220 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 GTF2BQ00403 316 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 CEBPZQ03701 1054 aaKnown RBP13.64□□□□□ -0.23
SNX1-209ENST00000559961 ZBTB41Q5SVQ8 909 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 ZNF852Q6ZMS4 543 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 STXBP4Q6ZWJ1 553 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 DYMQ7RTS9 669 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 C1orf210Q8IVY1 113 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 SYCP3Q8IZU3 236 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 FAM200AQ8TCP9 573 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 POMGNT1Q8WZA1 660 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 KCNN1Q92952 543 aa13.64□□□□□ -0.23
SNX1-209ENST00000559961 E2F7Q96AV8 911 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms