RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TSPAN1O60635 241 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 CD4P01730 458 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 NR3C1P04150 777 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 ADRB2P07550 413 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 CKBP12277 381 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 DARSP14868 501 aaKnown RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 CCNE1P24864 410 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 ITGB8P26012 769 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 TMOD1P28289 359 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 CD52P31358 61 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 TNFSF9P41273 254 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 DNM2P50570 870 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 CDK7P50613 346 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 AFF1P51825 1210 aaKnown RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 CCL23P55773 120 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 PTENP60484 403 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 OSTNP61366 133 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 GPLD1P80108 840 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 MRPS6P82932 125 aaKnown RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 GTF2BQ00403 316 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 NRG1Q02297 640 aaPredicted RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 PLAURQ03405 335 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 TLE2Q04725 743 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 FAAP100Q0VG06 881 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 PSMD2Q13200 908 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 MXD4Q14582 209 aaPredicted RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 GPNMBQ14956 572 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 SNX17Q15036 470 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 OCLNQ16625 522 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 KNOP1Q1ED39 458 aaKnown RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 BMT2Q1RMZ1 405 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 COBLL1Q53SF7 1204 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 TMEM164Q5U3C3 297 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 SCARA3Q6AZY7 606 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 ARMCX5Q6P1M9 558 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 FAM228AQ86W67 206 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 IRF2BP1Q8IU81 584 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 WFDC8Q8IUA0 241 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 CREBRFQ8IUR6 639 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 ZBTB8OSQ8IWT0 167 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 DMRTC2Q8IXT2 367 aaPredicted RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 SYCP3Q8IZU3 236 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 CSGALNACT2Q8N6G5 542 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 ZNF507Q8TCN5 953 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 PLEKHO2Q8TD55 490 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 TCP11Q8WWU5 503 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 PIK3R5Q8WYR1 880 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 ELMO3Q96BJ8 720 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 JPH2Q9BR39 696 aaPredicted RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 ANP32EQ9BTT0 268 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 EIF2AQ9BY44 585 aaKnown RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 PDZD7Q9H5P4 517 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 AGO3Q9H9G7 860 aaKnown RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 TAB2Q9NYJ8 693 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 FRRS1LQ9P0K9 344 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 ZFATQ9P243 1243 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 SEL1LQ9UBV2 794 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 RWDD2AQ9UIY3 292 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 FNDC3AQ9Y2H6 1198 aaKnown RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 PPME1Q9Y570 386 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 TRPV2Q9Y5S1 764 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 CNTNAP2Q9UHC6 1331 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 TRIM43BA6NCK2 446 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 GOLGA6L3A6NEY3 463 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 BECN2A8MW95 431 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 K7ERI5 159 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 AKAP3O75969 853 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 NPTXRO95502 500 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 GHRHP01286 108 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 TRIM49P0CI25 452 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 TRIM49CP0CI26 452 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 GNAT1P11488 350 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 ARF4P18085 180 aaPredicted RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 NR2F2P24468 414 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 ERCC5P28715 1186 aaPredicted RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 HOXA11P31270 313 aaPredicted RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 CYP2C18P33260 490 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 MATR3P43243 847 aaKnown RBP eCLIP5.69□□□□□ -1.5
SPG11-220ENST00000559933 ACOT2P49753 483 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 LIG4P49917 911 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 NRLP54845 237 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 SPAG1Q07617 926 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 STRN3Q13033 797 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 PRPF4BQ13523 1007 aaKnown RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 STIM1Q13586 685 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 TFDP1Q14186 410 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 LPIN1Q14693 890 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 NAA30Q147X3 362 aaPredicted RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 PPP2R5AQ15172 486 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 ZNF568Q3ZCX4 644 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 FBXO47Q5MNV8 452 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 ATF7IP2Q5U623 682 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 CDKAL1Q5VV42 579 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 SPATA1Q5VX52 437 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 CEP135Q66GS9 1140 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 LMBRD2Q68DH5 695 aaPredicted RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 CENPPQ6IPU0 288 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 TAF2Q6P1X5 1199 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 CATSPER4Q7RTX7 472 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 CBWD2Q8IUF1 395 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms