RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 APBB2Q92870 758 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 CGRRF1Q99675 332 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 RSAD1Q9HA92 442 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 CNTN3Q9P232 1028 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 MRFAP1Q9Y605 127 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 RNF225M0QZC1 329 aaPredicted RBP12.49□□□□□ -0.41
TM2D3-208ENST00000559891 PARNO95453 639 aaKnown RBP12.49□□□□□ -0.41
TM2D3-208ENST00000559891 RFC2P35250 354 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 YARSP54577 528 aaKnown RBP12.49□□□□□ -0.41
TM2D3-208ENST00000559891 ZBTB6Q15916 424 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 XKR4Q5GH76 650 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 DPY19L2P1Q6NXN4 242 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 C15orf39Q6ZRI6 1047 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 ZNF280BQ86YH2 543 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 GPR161Q8N6U8 529 aaKnown RBP12.49□□□□□ -0.41
TM2D3-208ENST00000559891 LMO3Q8TAP4 145 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 SIX4Q9UIU6 781 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 AJAP1Q9UKB5 411 aaPredicted RBP12.49□□□□□ -0.41
TM2D3-208ENST00000559891 ZBBXA8MT70 800 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 RAB27AP51159 221 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 GNG11P61952 73 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 TMEM132DQ14C87 1099 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 PAN2Q504Q3 1202 aaKnown RBP12.49□□□□□ -0.41
TM2D3-208ENST00000559891 TOGARAM2Q6ZUX3 1019 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 RSRC2Q7L4I2 434 aaKnown RBP12.49□□□□□ -0.41
TM2D3-208ENST00000559891 TRAPPC11Q7Z392 1133 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 WDR49Q8IV35 697 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 PPP1R10Q96QC0 940 aaKnown RBP12.49□□□□□ -0.41
TM2D3-208ENST00000559891 WDR24Q96S15 920 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 UBXN6Q9BZV1 441 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 TMEM161AQ9NX61 479 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 SCN1AP35498 2009 aa12.49□□□□□ -0.41
TM2D3-208ENST00000559891 PDCD11Q14690 1871 aaKnown RBP12.48□□□□□ -0.41
TM2D3-208ENST00000559891 COL4A6Q14031 1691 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 DDHD2O94830 711 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 FGBP02675 491 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 ITGB3P05106 788 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 PBX1P40424 430 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 PBX3P40426 434 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 MAGEA10P43363 369 aaPredicted RBP12.48□□□□□ -0.41
TM2D3-208ENST00000559891 MXI1P50539 228 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 BIRC3Q13489 604 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 ZACNQ401N2 412 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 RPUSD2Q8IZ73 545 aaKnown RBP12.48□□□□□ -0.41
TM2D3-208ENST00000559891 ANKRD20A12PQ8NF67 263 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 CASD1Q96PB1 797 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 ASB7Q9H672 318 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 C1orf112Q9NSG2 853 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 SIK3Q9Y2K2 1263 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 PCDHB7Q9Y5E2 793 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 CHD7Q9P2D1 2997 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
TM2D3-208ENST00000559891 CASTOR2A6NHX0 329 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 IL18RAPO95256 599 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 KRT19P08727 400 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 TMEM191BP0C7N4 346 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 PON1P27169 355 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 ADKP55263 362 aaKnown RBP12.47□□□□□ -0.41
TM2D3-208ENST00000559891 MYL6P60660 151 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 MYL7Q01449 175 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 PPIGQ13427 754 aaKnown RBP eCLIP12.47□□□□□ -0.41
TM2D3-208ENST00000559891 EPC2Q52LR7 807 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 KRT39Q6A163 491 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 FAM109BQ6ICB4 259 aaPredicted RBP12.47□□□□□ -0.41
TM2D3-208ENST00000559891 APBB1IPQ7Z5R6 666 aaPredicted RBP12.47□□□□□ -0.41
TM2D3-208ENST00000559891 KAT5Q92993 513 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 TATDN2Q93075 761 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 PANX2Q96RD6 677 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 PLEKHA5Q9HAU0 1116 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 TMEM8AQ9HCN3 771 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 SIX2Q9NPC8 291 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 FAM207AQ9NSI2 230 aaPredicted RBP12.47□□□□□ -0.41
TM2D3-208ENST00000559891 DNAJB4Q9UDY4 337 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 GIT1Q9Y2X7 761 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 TDRD15B5MCY1 1934 aaKnown RBP12.47□□□□□ -0.41
TM2D3-208ENST00000559891 ABHD14A-ACY1A0A1B0GW23 586 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 EOMESO95936 686 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 HLA-DRAP01903 254 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 KCNE1P15382 129 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 POLR2BP30876 1174 aaKnown RBP12.47□□□□□ -0.41
TM2D3-208ENST00000559891 DUOXA2Q1HG44 320 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 CC2D1AQ6P1N0 951 aaPredicted RBP12.47□□□□□ -0.41
TM2D3-208ENST00000559891 ARHGEF19Q8IW93 802 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 C3orf58Q8NDZ4 430 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 TOP1MTQ969P6 601 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 APOBEC3GQ9HC16 384 aaKnown RBP12.47□□□□□ -0.41
TM2D3-208ENST00000559891 TBC1D13Q9NVG8 400 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 DPP3Q9NY33 737 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 GCNT4Q9P109 453 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 LRFN2Q9ULH4 789 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 PDE4DIPQ5VU43 2346 aa12.47□□□□□ -0.41
TM2D3-208ENST00000559891 FNDC1Q4ZHG4 1894 aaPredicted RBP12.46□□□□□ -0.41
TM2D3-208ENST00000559891 GRXCR1A8MXD5 290 aa12.46□□□□□ -0.41
TM2D3-208ENST00000559891 H0YGN5 161 aa12.46□□□□□ -0.41
TM2D3-208ENST00000559891 NOL4O94818 638 aa12.46□□□□□ -0.41
TM2D3-208ENST00000559891 ITGB1P05556 798 aa12.46□□□□□ -0.41
TM2D3-208ENST00000559891 CLCNKBP51801 687 aa12.46□□□□□ -0.41
TM2D3-208ENST00000559891 KYAT1Q16773 422 aa12.46□□□□□ -0.41
TM2D3-208ENST00000559891 FILIP1LQ4L180 1135 aa12.46□□□□□ -0.41
TM2D3-208ENST00000559891 PHLDB3Q6NSJ2 640 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms