RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ELSPBP1Q96BH3 223 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 BORCS6Q96GS4 357 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 SUSD3Q96L08 255 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 MMTAG2Q9BU76 263 aaKnown RBP14.33□□□□□ -0.12
TPM1-220ENST00000559556 TIPINQ9BVW5 301 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 PLA2G2FQ9BZM2 168 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 SPATA6Q9NWH7 488 aaPredicted RBP14.33□□□□□ -0.12
TPM1-220ENST00000559556 INSL5Q9Y5Q6 135 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 MYOFQ9NZM1 2061 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 PI4KAP42356 2102 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 CEP295Q9C0D2 2601 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 FAM170BA6NMN3 283 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 H7C4K7 107 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 LAMTOR5O43504 91 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 KINO60870 393 aaKnown RBP14.32□□□□□ -0.12
TPM1-220ENST00000559556 MICAL2O94851 1124 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 SEC24AO95486 1093 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 CD72P21854 359 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 GUCY2CP25092 1073 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 TARSP26639 723 aaKnown RBP14.32□□□□□ -0.12
TPM1-220ENST00000559556 ELF1P32519 619 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 RPS9P46781 194 aaKnown RBP14.32□□□□□ -0.12
TPM1-220ENST00000559556 NOLC1Q14978 699 aaKnown RBP eCLIP14.32□□□□□ -0.12
TPM1-220ENST00000559556 IL17AQ16552 155 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 ZBTB41Q5SVQ8 909 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 TANGO2Q6ICL3 276 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 KIAA2013Q8IYS2 634 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 C18orf25Q96B23 403 aaPredicted RBP14.32□□□□□ -0.12
TPM1-220ENST00000559556 RMDN1Q96DB5 314 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 MCRS1Q96EZ8 462 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 NELL2Q99435 816 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 CORO1BQ9BR76 489 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 NTPCRQ9BSD7 190 aaKnown RBP14.32□□□□□ -0.12
TPM1-220ENST00000559556 FBXL5Q9UKA1 691 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 NUB1Q9Y5A7 615 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 PCDHGA2Q9Y5H1 932 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 CEP192Q8TEP8 1941 aa14.32□□□□□ -0.12
TPM1-220ENST00000559556 SHISA7A6NL88 538 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 SLC16A4O15374 487 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 TOM1L1O75674 476 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 CDC25AP30304 524 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 CCR2P41597 374 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 HYIQ5T013 277 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 ERICH6BQ5W0A0 696 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 ZNF280DQ6N043 979 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 TMEM161BQ8NDZ6 487 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 SPIRE2Q8WWL2 714 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 NELL1Q92832 810 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 TCEAL4Q96EI5 215 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 ZBTB45Q96K62 511 aaPredicted RBP14.31□□□□□ -0.12
TPM1-220ENST00000559556 TBC1D32Q96NH3 1257 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 ASB16Q96NS5 453 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 KIF2CQ99661 725 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 HINFPQ9BQA5 517 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 TCHPQ9BT92 498 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 CYP4F11Q9HBI6 524 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.31□□□□□ -0.12
TPM1-220ENST00000559556 HEBP1Q9NRV9 189 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 ANKFY1Q9P2R3 1169 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 MAFFQ9ULX9 164 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 USP24Q9UPU5 2620 aa14.31□□□□□ -0.12
TPM1-220ENST00000559556 ZNF197O14709 1029 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 NCAM2O15394 837 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 HARSP12081 509 aaKnown RBP14.3□□□□□ -0.12
TPM1-220ENST00000559556 MCM4P33991 863 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 EPHA5P54756 1037 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 STRN3Q13033 797 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 FZD5Q13467 585 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 SLC10A6Q3KNW5 377 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 CTXN3Q4LDR2 81 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 FAM78AQ5JUQ0 283 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 ZPBP2Q6X784 338 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 ZNF852Q6ZMS4 543 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 DTHD1Q6ZMT9 781 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 PDZD4Q76G19 769 aaPredicted RBP14.3□□□□□ -0.12
TPM1-220ENST00000559556 ZNF687Q8N1G0 1237 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 KCTD17Q8N5Z5 321 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 ZBTB44Q8NCP5 570 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 PRMT8Q9NR22 394 aaPredicted RBP14.3□□□□□ -0.12
TPM1-220ENST00000559556 AFF4Q9UHB7 1163 aaKnown RBP14.3□□□□□ -0.12
TPM1-220ENST00000559556 KCNG1Q9UIX4 513 aa14.3□□□□□ -0.12
TPM1-220ENST00000559556 MRPS17Q9Y2R5 130 aaKnown RBP14.3□□□□□ -0.12
TPM1-220ENST00000559556 THADAQ6YHU6 1953 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 NRG2O14511 850 aaPredicted RBP14.29□□□□□ -0.12
TPM1-220ENST00000559556 LILRB5O75023 590 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 MAPTP10636 758 aaKnown RBP14.29□□□□□ -0.12
TPM1-220ENST00000559556 PLS3P13797 630 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 ARPP19P56211 112 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 ATP2C1P98194 919 aaPredicted RBP14.29□□□□□ -0.12
TPM1-220ENST00000559556 CSTF1Q05048 431 aaKnown RBP14.29□□□□□ -0.12
TPM1-220ENST00000559556 MCL1Q07820 350 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 ADCY1Q08828 1119 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 ELMOD1Q8N336 334 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 DCLK2Q8N568 766 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 SYT2Q8N9I0 419 aaPredicted RBP14.29□□□□□ -0.12
TPM1-220ENST00000559556 APPL2Q8NEU8 664 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 BEST2Q8NFU1 509 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 DDX12PQ92771 950 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 KCNN1Q92952 543 aa14.29□□□□□ -0.12
TPM1-220ENST00000559556 ZFP14Q9HCL3 533 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms