RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 EEF2KMTQ96G04 330 aa21.94■■□□□ 1.1
TSPAN3-207ENST00000559494 IGFLR1Q9H665 355 aa21.94■■□□□ 1.1
TSPAN3-207ENST00000559494 MRPL17Q9NRX2 175 aaKnown RBP21.94■■□□□ 1.1
TSPAN3-207ENST00000559494 NUB1Q9Y5A7 615 aa21.94■■□□□ 1.1
TSPAN3-207ENST00000559494 VWA8A3KMH1 1905 aa21.94■■□□□ 1.1
TSPAN3-207ENST00000559494 C2CD2LO14523 706 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 TRAPPC3O43617 180 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 FGFR3P22607 806 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 CA8P35219 290 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 NRIP1P48552 1158 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 GLUD2P49448 558 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 DUOXA2Q1HG44 320 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 RTP2Q5QGT7 225 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 WDR49Q8IV35 697 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 FNBP1Q96RU3 617 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 CGRRF1Q99675 332 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 TSG101Q99816 390 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 MTMR12Q9C0I1 747 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 FRMD4BQ9Y2L6 1034 aa21.93■■□□□ 1.1
TSPAN3-207ENST00000559494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 MAPK13O15264 365 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 SPTLC1O15269 473 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 URODP06132 367 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 TNNI1P19237 187 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 AARSP49588 968 aaKnown RBP eCLIP21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 LILRA4P59901 499 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 LRRC63Q05C16 580 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 DUSP6Q16828 381 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 KIAA1841Q6NSI8 718 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 CEP57Q86XR8 500 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 ZC3H3Q8IXZ2 948 aaKnown RBP21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 GPR65Q8IYL9 337 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 NELFBQ8WX92 580 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 RIN2Q8WYP3 895 aaPredicted RBP21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 PPP2R3CQ969Q6 453 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 SUSD3Q96L08 255 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 DUSP9Q99956 384 aaKnown RBP21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 TTPALQ9BTX7 342 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 RXFP1Q9HBX9 757 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 PRDM6Q9NQX0 595 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 SIX4Q9UIU6 781 aa21.92■■□□□ 1.1
TSPAN3-207ENST00000559494 CETN3O15182 167 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 ITGB3P05106 788 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 CNPP09543 421 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 TMEM191BP0C7N4 346 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 TKTP29401 623 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 PSMC2P35998 433 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 DLG4P78352 724 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 CLDN10P78369 228 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 FKBP3Q00688 224 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 COL19A1Q14993 1142 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 SKIV2LQ15477 1246 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 TTI2Q6NXR4 508 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 PRSS55Q6UWB4 352 aaPredicted RBP21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 RBM43Q6ZSC3 357 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 CSGALNACT2Q8N6G5 542 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 LNX1Q8TBB1 728 aaPredicted RBP21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 TMC2Q8TDI7 906 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 BORCS6Q96GS4 357 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 ANKRD36BP1Q96IX9 119 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 KLHL5Q96PQ7 755 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 AGAP1Q9UPQ3 857 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 CTNND2Q9UQB3 1225 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 SSX2IPQ9Y2D8 614 aa21.91■■□□□ 1.1
TSPAN3-207ENST00000559494 LRRIQ3A6PVS8 624 aaPredicted RBP21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 M0QZQ0 153 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 LINC01565O15544 149 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 CLASP2O75122 1294 aaKnown RBP21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 TNNC2P02585 160 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 POLR2BP30876 1174 aaKnown RBP21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 STX17P56962 302 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 ADAM15Q13444 863 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 CTC1Q2NKJ3 1217 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 C1orf220Q5T0J3 134 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 TRAPPC11Q7Z392 1133 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 FAM186BQ8IYM0 893 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 MLKLQ8NB16 471 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 PIK3R5Q8WYR1 880 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 ITGA11Q9UKX5 1188 aa21.9■■□□□ 1.1
TSPAN3-207ENST00000559494 TEX28O15482 410 aa21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 NCK2O43639 380 aa21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 NLRP12P59046 1061 aa21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 MCCD1P59942 119 aaPredicted RBP21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 RBP5P82980 135 aa21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 RBM10P98175 930 aaKnown RBP21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 PAK1Q13153 545 aa21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 EFHBQ8N7U6 833 aa21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 SENP8Q96LD8 212 aa21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 CDCA3Q99618 268 aaPredicted RBP21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 MKNK1Q9BUB5 465 aa21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 TMEM63CQ9P1W3 806 aa21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 PCDHB8Q9UN66 801 aa21.89■■□□□ 1.1
TSPAN3-207ENST00000559494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.88■■□□□ 1.09
TSPAN3-207ENST00000559494 SYN3O14994 580 aa21.88■■□□□ 1.09
TSPAN3-207ENST00000559494 CST3P01034 146 aaPredicted RBP21.88■■□□□ 1.09
TSPAN3-207ENST00000559494 KRT19P08727 400 aa21.88■■□□□ 1.09
TSPAN3-207ENST00000559494 RPL17P18621 184 aaKnown RBP21.88■■□□□ 1.09
TSPAN3-207ENST00000559494 PAX3P23760 479 aa21.88■■□□□ 1.09
TSPAN3-207ENST00000559494 TAF6P49848 677 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms