RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 FEZF2Q8TBJ5 459 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 TSG101Q99816 390 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 C11orf84Q9BUA3 381 aaPredicted RBP11.78□□□□□ -0.52
TPM1-217ENST00000559108 GTPBP4Q9BZE4 634 aaKnown RBP11.78□□□□□ -0.52
TPM1-217ENST00000559108 XYLT2Q9H1B5 865 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 SLC38A7Q9NVC3 462 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 ADAM28Q9UKQ2 775 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 RWDD3Q9Y3V2 267 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 NME7Q9Y5B8 376 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 PCDHB12Q9Y5F1 795 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 MTCH2Q9Y6C9 303 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 EYSQ5T1H1 3165 aa11.77□□□□□ -0.52
TPM1-217ENST00000559108 ADAM12O43184 909 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 LILRB3O75022 631 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 TNNI1P19237 187 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 RPL13P26373 211 aaKnown RBP11.77□□□□□ -0.53
TPM1-217ENST00000559108 ERCC5P28715 1186 aaPredicted RBP11.77□□□□□ -0.53
TPM1-217ENST00000559108 GTF2F1P35269 517 aaKnown RBP eCLIP11.77□□□□□ -0.53
TPM1-217ENST00000559108 PPP1R2P41236 205 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 MYL6P60660 151 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 PTPN14Q15678 1187 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 CDKAL1Q5VV42 579 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 DCLRE1AQ6PJP8 1040 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 PRSS55Q6UWB4 352 aaPredicted RBP11.77□□□□□ -0.53
TPM1-217ENST00000559108 SV2AQ7L0J3 742 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 FILIP1Q7Z7B0 1213 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 DDX53Q86TM3 631 aaKnown RBP11.77□□□□□ -0.53
TPM1-217ENST00000559108 NT5DC4Q86YG4 428 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 TRIM59Q8IWR1 403 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.53
TPM1-217ENST00000559108 VPS52Q8N1B4 723 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 BEST2Q8NFU1 509 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 VN1R2Q8NFZ6 395 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 TAS1R2Q8TE23 839 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 SEMA4DQ92854 862 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 CEP63Q96MT8 703 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 UROC1Q96N76 676 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 HERC2P3Q9BVR0 1158 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 COLEC11Q9BWP8 271 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.77□□□□□ -0.53
TPM1-217ENST00000559108 AAASQ9NRG9 546 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 CHST7Q9NS84 486 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 AGAP1Q9UPQ3 857 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 FRMD4BQ9Y2L6 1034 aa11.77□□□□□ -0.53
TPM1-217ENST00000559108 TIMM13Q9Y5L4 95 aaPredicted RBP11.77□□□□□ -0.53
TPM1-217ENST00000559108 BICDL2A1A5D9 508 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 SOD2P04179 222 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 TMEM191BP0C7N4 346 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 RPL17P18621 184 aaKnown RBP11.76□□□□□ -0.53
TPM1-217ENST00000559108 PTMSP20962 102 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 FGFR3P22607 806 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 RPL9P32969 192 aaKnown RBP11.76□□□□□ -0.53
TPM1-217ENST00000559108 PPM1AP35813 382 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 MARSP56192 900 aaKnown RBP11.76□□□□□ -0.53
TPM1-217ENST00000559108 LILRA4P59901 499 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 IQCB1Q15051 598 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 CCDC142Q17RM4 750 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 SKOR2Q2VWA4 1001 aaPredicted RBP11.76□□□□□ -0.53
TPM1-217ENST00000559108 ZACNQ401N2 412 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 FAM171A1Q5VUB5 890 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 KIAA0319Q5VV43 1072 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 PLPP4Q5VZY2 271 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 SPOPLQ6IQ16 392 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 INTS8Q75QN2 995 aaKnown RBP11.76□□□□□ -0.53
TPM1-217ENST00000559108 DDX27Q96GQ7 796 aaKnown RBP11.76□□□□□ -0.53
TPM1-217ENST00000559108 TMEM169Q96HH4 297 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 SUSD3Q96L08 255 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 CNOT6LQ96LI5 555 aaKnown RBP11.76□□□□□ -0.53
TPM1-217ENST00000559108 TSPAN18Q96SJ8 248 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 TCF25Q9BQ70 676 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 RTP3Q9BQQ7 232 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 SDCBP2Q9H190 292 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 MMRN2Q9H8L6 949 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 ANO10Q9NW15 660 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 NFE2L3Q9Y4A8 694 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 PTPRDP23468 1912 aa11.76□□□□□ -0.53
TPM1-217ENST00000559108 C2orf71A6NGG8 1288 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 M0QZQ0 153 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 TADA2AO75478 443 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 CTSAP10619 480 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 EPB41P11171 864 aaKnown RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 POU3F3P20264 500 aaPredicted RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 SURF1Q15526 300 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 DUOXA2Q1HG44 320 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 DCAF17Q5H9S7 520 aaPredicted RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 APTXQ7Z2E3 356 aaKnown RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 LIMS2Q7Z4I7 341 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 FRMD5Q7Z6J6 570 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 OSTM1Q86WC4 334 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 AOPEPQ8N6M6 819 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 LNX1Q8TBB1 728 aaPredicted RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 ENOX1Q8TC92 643 aaKnown RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 SYAP1Q96A49 352 aaPredicted RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 MRPL38Q96DV4 380 aaKnown RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 SENP8Q96LD8 212 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 FNBP1Q96RU3 617 aa11.75□□□□□ -0.53
TPM1-217ENST00000559108 APOBEC3GQ9HC16 384 aaKnown RBP11.75□□□□□ -0.53
TPM1-217ENST00000559108 TLR9Q9NR96 1032 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms