RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 GRHPRQ9UBQ7 328 aa2.72□□□□□ -1.97
GABPB1-209ENST00000559100 ZNF212Q9UDV6 495 aa2.72□□□□□ -1.97
GABPB1-209ENST00000559100 FBXO9Q9UK97 447 aaPredicted RBP2.72□□□□□ -1.97
GABPB1-209ENST00000559100 VWA7Q9Y334 891 aa2.72□□□□□ -1.97
GABPB1-209ENST00000559100 A0A1W2PPC4 97 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 RRN3P2A6NIE6 340 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 M0R3H8 397 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 HRKO00198 91 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 TRIM38O00635 465 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 GRM6O15303 877 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 SASH1O94885 1247 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 THP07101 528 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ANXA2P07355 339 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 GJB1P08034 283 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 DHRS4L1P0CG22 281 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 IDEP14735 1019 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ATP5JP18859 108 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 POLD1P28340 1107 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 PDIA3P30101 505 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ETV4P43268 484 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 CARSP49589 748 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 CDR1P51861 262 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ARFIP2P53365 341 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ITGA8P53708 1063 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 MLLT6P55198 1093 aaPredicted RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 GEMIN4P57678 1058 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 RAP2BP61225 183 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ATP2C1P98194 919 aaPredicted RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 PTH1RQ03431 593 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 FOXD4Q12950 439 aaPredicted RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 RTP5Q14D33 572 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 EIF4HQ15056 248 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 PCOLCEQ15113 449 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 TAF5Q15542 800 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 MAPRE1Q15691 268 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ZNF568Q3ZCX4 644 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ZACNQ401N2 412 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 PABPC1LQ4VXU2 614 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 CCDC93Q567U6 631 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 L1TD1Q5T7N2 865 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ANKRD45Q5TZF3 282 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 AFMIDQ63HM1 303 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ZNF529Q6P280 563 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 RFX8Q6ZV50 586 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 UNC13DQ70J99 1090 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 UBE3BQ7Z3V4 1068 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 MAATS1Q7Z4T9 603 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 TRMT2AQ8IZ69 625 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ABI1Q8IZP0 508 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 BCL6BQ8N143 479 aaPredicted RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 SDR16C5Q8N3Y7 309 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 SLC15A4Q8N697 577 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 PPHLN1Q8NEY8 458 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 NUDT10Q8NFP7 164 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ZSCAN18Q8TBC5 510 aaPredicted RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ATXN2LQ8WWM7 1075 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 CASKIN2Q8WXE0 1202 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 SLC7A6OSQ96CW6 309 aaPredicted RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 NUDT11Q96G61 164 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 MPP4Q96JB8 637 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 RPL10LQ96L21 214 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 SENP7Q9BQF6 1050 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 HEPHQ9BQS7 1158 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ISCA1Q9BUE6 129 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 SORBS1Q9BX66 1292 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 STK33Q9BYT3 514 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 TRIM54Q9BYV2 358 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 MAGEB5Q9BZ81 275 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 MAGEH1Q9H213 219 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 EPB41L4BQ9H329 900 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 OBP2BQ9NPH6 170 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 SAGE1Q9NXZ1 904 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 MAP3K20Q9NYL2 800 aaKnown RBP2.71□□□□□ -1.98
GABPB1-209ENST00000559100 COL20A1Q9P218 1284 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 MYO1AQ9UBC5 1043 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 SWAP70Q9UH65 585 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 MAN2B2Q9Y2E5 1009 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 ZDHHC9Q9Y397 364 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 PCDHA5Q9Y5H7 936 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 PMF1-BGLAPU3KQ54 211 aa2.71□□□□□ -1.98
GABPB1-209ENST00000559100 FAM234BA2RU67 622 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 TRIM43BA6NCK2 446 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 HMX3A6NHT5 357 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 ZNF785A8K8V0 405 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 LGALS16A8MUM7 142 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 NT5C1B-RDH14C9J2C7 533 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 PYCARD-AS1I3L0S3 204 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 RAB27BO00194 218 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 EIF3FO00303 357 aaPredicted RBP2.7□□□□□ -1.98
GABPB1-209ENST00000559100 HNRNPDLO14979 420 aaKnown RBP2.7□□□□□ -1.98
GABPB1-209ENST00000559100 PLA2G6O60733 806 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 UNC5CO95185 931 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 PAPLNO95428 1278 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 MATN4O95460 622 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 MT-ND5P03915 603 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 JUNP05412 331 aaKnown RBP2.7□□□□□ -1.98
GABPB1-209ENST00000559100 PYGLP06737 847 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 GRPP07492 148 aa2.7□□□□□ -1.98
GABPB1-209ENST00000559100 HSP90AA1P07900 732 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms