RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 K7ERI5 159 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 ABLIM1O14639 778 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 PER2O15055 1255 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 SLC16A4O15374 487 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 HSP90AA1P07900 732 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZSCAN22P10073 491 aaPredicted RBP6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 PLS3P13797 630 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 MAPK8P45983 427 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 RBM10P98175 930 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 KRT17Q04695 432 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 ADAM15Q13444 863 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 DHX8Q14562 1220 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 DUSP6Q16828 381 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 ATF7IP2Q5U623 682 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 PDE12Q6L8Q7 609 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 EP400NLQ6ZTU2 488 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 RBM23Q86U06 439 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 GPBP1Q86WP2 473 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 COLGALT2Q8IYK4 626 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 EFHBQ8N7U6 833 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 CEP120Q8N960 986 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 LINC00301Q8NCQ3 95 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 TMEM161BQ8NDZ6 487 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 VN1R2Q8NFZ6 395 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 MICAL1Q8TDZ2 1067 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 RAD54LQ92698 747 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 PPP2R3CQ969Q6 453 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 TMEM169Q96HH4 297 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 HSH2DQ96JZ2 352 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 CITED4Q96RK1 184 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 UHRF1Q96T88 793 aaPredicted RBP6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 ACO2Q99798 780 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 TMEM175Q9BSA9 504 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 NTPCRQ9BSD7 190 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZBP1Q9H171 429 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 CXCL16Q9H2A7 254 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 IGFLR1Q9H665 355 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 KMT5AQ9NQR1 393 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 MARCH5Q9NX47 278 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 SNTG2Q9NY99 539 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 KANSL3Q9P2N6 904 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 PUF60Q9UHX1 559 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 TNFSF13BQ9Y275 285 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 TRIOO75962 3097 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 CITO14578 2027 aa6.61□□□□□ -1.35
CTDSPL2-204ENST00000558966 A0A087X0B3 334 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 FIGNL2A6NMB9 653 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 F8W810 466 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 PTGESO14684 152 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 NRP1O14786 923 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 NCK2O43639 380 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 RECQL4O94761 1208 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 F13A1P00488 732 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 PDGFAP04085 211 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 IL9P15248 144 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 PROZP22891 400 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZNF131P52739 623 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 KCNC3Q14003 757 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 GIT2Q14161 759 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 CLUL1Q15846 466 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 DCAF4L1Q3SXM0 396 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 HACE1Q8IYU2 909 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 VPS52Q8N1B4 723 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 RASSF8Q8NHQ8 419 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 LARP4BQ92615 738 aaKnown RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 MSLNLQ96KJ4 702 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 FAM129BQ96TA1 746 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 ADPGKQ9BRR6 497 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 TARS2Q9BW92 718 aaKnown RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 CDT1Q9H211 546 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 TLE6Q9H808 572 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 PTPRHQ9HD43 1115 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 NGRNQ9NPE2 291 aaKnown RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 ENTPD7Q9NQZ7 604 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 CLEC1BQ9P126 229 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 CACNG4Q9UBN1 327 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 PARP2Q9UGN5 583 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 ODF2LQ9ULJ1 636 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 BARX2Q9UMQ3 279 aaPredicted RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 PRG3Q9Y2Y8 225 aaPredicted RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 C2orf71A6NGG8 1288 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 SPTLC2O15270 562 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 YEATS4O95619 227 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 EFEMP2O95967 443 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 CTSAP10619 480 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 MAPTP10636 758 aaKnown RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 MZF1P28698 734 aaPredicted RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 OR1G1P47890 313 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 NDUFV1P49821 464 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 NCKAP1LP55160 1127 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 EHHADHQ08426 723 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 GRIK3Q13003 919 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 SMC1AQ14683 1233 aaKnown RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 STK38Q15208 465 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 NAB2Q15742 525 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 FOXD4L6Q3SYB3 417 aaPredicted RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZNF568Q3ZCX4 644 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 FOXD4L3Q6VB84 417 aaPredicted RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 LYSMD3Q7Z3D4 306 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 DDX53Q86TM3 631 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms