RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 GPR65Q8IYL9 337 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 SMYD4Q8IYR2 804 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 C1orf127Q8N9H9 656 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 UROC1Q96N76 676 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 TMEM209Q96SK2 561 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 POP1Q99575 1024 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 TTPALQ9BTX7 342 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 CRISPLD1Q9H336 500 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 POMKQ9H5K3 350 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 C11orf16Q9NQ32 467 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 HSPBP1Q9NZL4 362 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 MTRRQ9UBK8 725 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 STK39Q9UEW8 545 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 NME7Q9Y5B8 376 aa13.73□□□□□ -0.21
RABGGTA-207ENST00000558936 SF3B1O75533 1304 aaKnown RBP eCLIP13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 EXTL3O43909 919 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 RHOBTB3O94955 611 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 URODP06132 367 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 KLRC2P26717 231 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 RPL9P32969 192 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 CA8P35219 290 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 CASP4P49662 377 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 LILRA4P59901 499 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 AMPD3Q01432 767 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 PPP2R3AQ06190 1150 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 BMS1Q14692 1282 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 PSMD5Q16401 504 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 VARS2Q5ST30 1063 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 RARS2Q5T160 578 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 TMC5Q6UXY8 1006 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 TMEM87AQ8NBN3 555 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 ELMO3Q96BJ8 720 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 ADAM7Q9H2U9 754 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 ASB7Q9H672 318 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 EPHX3Q9H6B9 360 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 MAN1C1Q9NR34 630 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 CIZ1Q9ULV3 898 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 UBQLN1Q9UMX0 589 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 MAPK8IP1Q9UQF2 711 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 C2CD2Q9Y426 696 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 ATP6V1DQ9Y5K8 247 aa13.72□□□□□ -0.21
RABGGTA-207ENST00000558936 WDR27A2RRH5 827 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 LOC730098B7Z3J9 87 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 HCRTO43612 131 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 SEC24AO95486 1093 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 OR1D2P34982 312 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 CDR1P51861 262 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 POU5F1Q01860 360 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 ALCAMQ13740 583 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 RAB33AQ14088 237 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 CCDC142Q17RM4 750 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 ZCWPW2Q504Y3 356 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 C12orf56Q8IXR9 622 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 CEP57L1Q8IYX8 460 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 GPD1LQ8N335 351 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 CASP10Q92851 521 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 TMEM206Q9H813 350 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 SLC38A7Q9NVC3 462 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 USP25Q9UHP3 1055 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 FBXW11Q9UKB1 542 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 FAM50BQ9Y247 325 aa13.71□□□□□ -0.21
RABGGTA-207ENST00000558936 LRRN2O75325 713 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 ABLIM3O94929 683 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 CST3P01034 146 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 OR4Q2P0C623 313 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 CD44P16070 742 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 DLG4P78352 724 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 ROR1Q01973 937 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 TMEM132DQ14C87 1099 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 POSTNQ15063 836 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 SLC8B1Q6J4K2 584 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 ARMCX5Q6P1M9 558 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 LIMS2Q7Z4I7 341 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 GPR149Q86SP6 731 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 ADHFE1Q8IWW8 467 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 SYCP3Q8IZU3 236 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 RDH13Q8NBN7 331 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 OR10T2Q8NGX3 314 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 TMEM174Q8WUU8 243 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 MFSD14AQ96MC6 490 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 DPP3Q9NY33 737 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 RBAKQ9NYW8 714 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 PRKAG3Q9UGI9 489 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 FBXL5Q9UKA1 691 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 EXOC7Q9UPT5 735 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 DERAQ9Y315 318 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 PCDHA5Q9Y5H7 936 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 BACE2Q9Y5Z0 518 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 CDY1Q9Y6F8 540 aa13.7□□□□□ -0.22
RABGGTA-207ENST00000558936 TECTAO75443 2155 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 UBE4BO95155 1302 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 OAZ2O95190 189 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 SRGAP2BP0DMP2 458 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms