RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 A0A1B0GVL5 298 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 FSD2A1L4K1 749 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 OGTO15294 1046 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 CLTAP09496 248 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 MCM4P33991 863 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 GTF2BQ00403 316 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 PPP2R3AQ06190 1150 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 BECN1Q14457 450 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 UPP1Q16831 310 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 AXDND1Q5T1B0 1012 aaPredicted RBP13.07□□□□□ -0.32
TPM1-216ENST00000558910 DCLRE1AQ6PJP8 1040 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 TMEM184AQ6ZMB5 413 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 ZNF720Q7Z2F6 126 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 PPFIBP1Q86W92 1011 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 RNF135Q8IUD6 432 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 MAP4K3Q8IVH8 894 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 FAM84AQ96KN4 292 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 SPATA32Q96LK8 384 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 POP1Q99575 1024 aaKnown RBP13.07□□□□□ -0.32
TPM1-216ENST00000558910 PHF7Q9BWX1 381 aaPredicted RBP13.07□□□□□ -0.32
TPM1-216ENST00000558910 ADAM7Q9H2U9 754 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 PIDD1Q9HB75 910 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 CHST7Q9NS84 486 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 SLC38A7Q9NVC3 462 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 DZANK1Q9NVP4 752 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 CNTN3Q9P232 1028 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 CFAP45Q9UL16 551 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 POLIQ9UNA4 740 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 SSX2IPQ9Y2D8 614 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 TIMM13Q9Y5L4 95 aaPredicted RBP13.07□□□□□ -0.32
TPM1-216ENST00000558910 IRAK3Q9Y616 596 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 TRIP11Q15643 1979 aa13.07□□□□□ -0.32
TPM1-216ENST00000558910 CCDC195A0A1B0GUA6 201 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 TGM5O43548 720 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 BRD1O95696 1058 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 HOXB8P17481 243 aaPredicted RBP13.06□□□□□ -0.32
TPM1-216ENST00000558910 GAP43P17677 238 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 OR1D2P34982 312 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 ENOX2Q16206 610 aaKnown RBP13.06□□□□□ -0.32
TPM1-216ENST00000558910 ATAT1Q5SQI0 421 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 JADE1Q6IE81 842 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 CD300LGQ6UXG3 332 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 ALKAL1Q6UXT8 129 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 NELFCDQ8IXH7 590 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 CCDC65Q8IXS2 484 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 IQUBQ8NA54 791 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 KREMEN2Q8NCW0 462 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 LNX1Q8TBB1 728 aaPredicted RBP13.06□□□□□ -0.32
TPM1-216ENST00000558910 SUSD6Q92537 303 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 RIPOR3Q96MK2 946 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 ACCSQ96QU6 501 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 STK39Q9UEW8 545 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 PRKAG3Q9UGI9 489 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 SERTAD1Q9UHV2 236 aa13.06□□□□□ -0.32
TPM1-216ENST00000558910 AGO2Q9UKV8 859 aaKnown RBP13.06□□□□□ -0.32
TPM1-216ENST00000558910 MYH15Q9Y2K3 1946 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 C2CD4DB7Z1M9 353 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 PPEF2O14830 753 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 NFICP08651 508 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 KCNE1P15382 129 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 KRT85P78386 507 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 L1TD1Q5T7N2 865 aaKnown RBP13.05□□□□□ -0.32
TPM1-216ENST00000558910 RSPO2Q6UXX9 243 aaPredicted RBP13.05□□□□□ -0.32
TPM1-216ENST00000558910 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
TPM1-216ENST00000558910 RDH13Q8NBN7 331 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 LEO1Q8WVC0 666 aaPredicted RBP13.05□□□□□ -0.32
TPM1-216ENST00000558910 UROC1Q96N76 676 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 CLSTN3Q9BQT9 956 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 FAM213AQ9BRX8 229 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 SFXN1Q9H9B4 322 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 RXFP1Q9HBX9 757 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 CDY1Q9Y6F8 540 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 ZMYM2Q9UBW7 1377 aa13.05□□□□□ -0.32
TPM1-216ENST00000558910 A0A0B4J269 797 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 CCL16O15467 120 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 DCXO43602 365 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 TRAPPC3O43617 180 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 EFEMP2O95967 443 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 ASGR2P07307 311 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
TPM1-216ENST00000558910 GBP2P32456 591 aaPredicted RBP13.04□□□□□ -0.32
TPM1-216ENST00000558910 MTHFRP42898 656 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 ITIH3Q06033 890 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 ELAVL2Q12926 359 aaKnown RBP13.04□□□□□ -0.32
TPM1-216ENST00000558910 CUL4BQ13620 913 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 XKR4Q5GH76 650 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 RESP18Q5W5W9 173 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 LMBRD2Q68DH5 695 aaPredicted RBP13.04□□□□□ -0.32
TPM1-216ENST00000558910 DSTYKQ6XUX3 929 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.04□□□□□ -0.32
TPM1-216ENST00000558910 CEP57L1Q8IYX8 460 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 SMG7Q92540 1137 aaKnown RBP13.04□□□□□ -0.32
TPM1-216ENST00000558910 CBWD1Q9BRT8 395 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 TRIM9Q9C026 710 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 TNMDQ9H2S6 317 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.04□□□□□ -0.32
TPM1-216ENST00000558910 RCOR1Q9UKL0 485 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 KCNH3Q9ULD8 1083 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 EXOC7Q9UPT5 735 aa13.04□□□□□ -0.32
TPM1-216ENST00000558910 TTC26A0AVF1 554 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms