RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ASB16Q96NS5 453 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 NCOA5Q9HCD5 579 aaKnown RBP10.8□□□□□ -0.68
SPG11-212ENST00000558790 KLF15Q9UIH9 416 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 FOXD3Q9UJU5 478 aaPredicted RBP10.8□□□□□ -0.68
SPG11-212ENST00000558790 PCDHB2Q9Y5E7 798 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 NOTCH4Q99466 2003 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 NARSO43776 548 aaKnown RBP10.79□□□□□ -0.68
SPG11-212ENST00000558790 MMP20O60882 483 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 N4BP1O75113 896 aaKnown RBP10.79□□□□□ -0.68
SPG11-212ENST00000558790 ZNF623O75123 536 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 CDC45O75419 566 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 MAFO75444 373 aaPredicted RBP10.79□□□□□ -0.68
SPG11-212ENST00000558790 DDHD2O94830 711 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 IFNAR1P17181 557 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 KLRC2P26717 231 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 DNM2P50570 870 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 CDC42EP1Q00587 391 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 TDGQ13569 410 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 LETM2Q2VYF4 491 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 LCE2AQ5TA79 106 aaPredicted RBP10.79□□□□□ -0.68
SPG11-212ENST00000558790 BLOC1S2Q6QNY1 142 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 DNAJC14Q6Y2X3 702 aaPredicted RBP10.79□□□□□ -0.68
SPG11-212ENST00000558790 AGMOQ6ZNB7 445 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 C15orf39Q6ZRI6 1047 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 URGCPQ8TCY9 931 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 KCNB2Q92953 911 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 KLHL5Q96PQ7 755 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 CITED4Q96RK1 184 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 EMILIN2Q9BXX0 1053 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 AGXT2Q9BYV1 514 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 INO80BQ9C086 356 aaPredicted RBP10.79□□□□□ -0.68
SPG11-212ENST00000558790 NIF3L1Q9GZT8 377 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 MINDY3Q9H8M7 445 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 RSAD1Q9HA92 442 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 KCNK12Q9HB15 430 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 IFT122Q9HBG6 1241 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 MAN1C1Q9NR34 630 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 MARCH5Q9NX47 278 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 FBXL21Q9UKT6 434 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 BPTFQ12830 3046 aa10.79□□□□□ -0.68
SPG11-212ENST00000558790 AKAP13Q12802 2813 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 SLC37A4O43826 429 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 POMCP01189 267 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 RPS6KB1P23443 525 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 MAP2K3P46734 347 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 ATXN1P54253 815 aaKnown RBP10.78□□□□□ -0.68
SPG11-212ENST00000558790 NLRP5P59047 1200 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 CCT2P78371 535 aaKnown RBP10.78□□□□□ -0.68
SPG11-212ENST00000558790 SRSF11Q05519 484 aaKnown RBP10.78□□□□□ -0.68
SPG11-212ENST00000558790 NPY5RQ15761 445 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 UBXN11Q5T124 520 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 FBXL16Q8N461 479 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 PGBD4Q96DM1 585 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 SH3GLB2Q9NR46 395 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 MRPL17Q9NRX2 175 aaKnown RBP10.78□□□□□ -0.68
SPG11-212ENST00000558790 PCDHA4Q9UN74 947 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 PRG3Q9Y2Y8 225 aaPredicted RBP10.78□□□□□ -0.68
SPG11-212ENST00000558790 COL4A3BPQ9Y5P4 624 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 SNX14Q9Y5W7 946 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 CLUHO75153 1309 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 CNTNAP2Q9UHC6 1331 aa10.78□□□□□ -0.68
SPG11-212ENST00000558790 CYP3A7-CYP3A51PA0A087WV96 503 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 ANKRD33BA6NCL7 494 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 NRP1O14786 923 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 SOD2P04179 222 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 URODP06132 367 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 CYP3A7P24462 503 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 HSPA4P34932 840 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 NPEPPSP55786 919 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 PSMC5P62195 406 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 EHHADHQ08426 723 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 ORC1Q13415 861 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 DTWD2Q8NBA8 298 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 CMASQ8NFW8 434 aaPredicted RBP10.77□□□□□ -0.69
SPG11-212ENST00000558790 RSAD2Q8WXG1 361 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 MBOAT7Q96N66 472 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 TMEM175Q9BSA9 504 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 HERC2P3Q9BVR0 1158 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 ABI2Q9NYB9 513 aaPredicted RBP10.77□□□□□ -0.69
SPG11-212ENST00000558790 CNTN3Q9P232 1028 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 WRAP73Q9P2S5 460 aaPredicted RBP10.77□□□□□ -0.69
SPG11-212ENST00000558790 STK39Q9UEW8 545 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 VAV3Q9UKW4 847 aa10.77□□□□□ -0.69
SPG11-212ENST00000558790 DMXL2Q8TDJ6 3036 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 IGF2RP11717 2491 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 KRBA1A5PL33 1030 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 F8W810 466 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 INPPL1O15357 1258 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 TEX28O15482 410 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 TNFRSF21O75509 655 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 RFPL2O75678 378 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 GLUD1P00367 558 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 MYBP10242 640 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 ARAFP10398 606 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 PDIA3P30101 505 aaKnown RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 HOXA11P31270 313 aaPredicted RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 GBP2P32456 591 aaPredicted RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 MLH1P40692 756 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 AK2P54819 239 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 MOXD1Q6UVY6 613 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms