RNA–Protein interactions for RNA: ENST00000558537.5

GATM-208, Transcript of glycine amidinotransferase, human

TSL 4

Gene GATM, Length 493 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GATM-208	ENST00000558537	DDX53	Q86TM3	631 aa	Known RBP	13.78	□□□□□ -0.2
GATM-208	ENST00000558537	RNF168	Q8IYW5	571 aa	Predicted RBP	13.78	□□□□□ -0.2
GATM-208	ENST00000558537	DEFB123	Q8N688	67 aa		13.78	□□□□□ -0.2
GATM-208	ENST00000558537	CXorf38	Q8TB03	319 aa		13.78	□□□□□ -0.2
GATM-208	ENST00000558537	POF1B	Q8WVV4	589 aa		13.78	□□□□□ -0.2
GATM-208	ENST00000558537	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.78	□□□□□ -0.2
GATM-208	ENST00000558537	ITGA11	Q9UKX5	1188 aa		13.78	□□□□□ -0.2
GATM-208	ENST00000558537	IKBKB	O14920	756 aa		13.77	□□□□□ -0.21
GATM-208	ENST00000558537	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
GATM-208	ENST00000558537	POLR2B	P30876	1174 aa	Known RBP	13.77	□□□□□ -0.21
GATM-208	ENST00000558537	AP3M2	P53677	418 aa		13.77	□□□□□ -0.21
GATM-208	ENST00000558537	MARS	P56192	900 aa	Known RBP	13.77	□□□□□ -0.21
GATM-208	ENST00000558537	CAMK1	Q14012	370 aa		13.77	□□□□□ -0.21
GATM-208	ENST00000558537	TPD52L1	Q16890	204 aa	Predicted RBP	13.77	□□□□□ -0.21
GATM-208	ENST00000558537	CCDC40	Q4G0X9	1142 aa		13.77	□□□□□ -0.21
GATM-208	ENST00000558537	TRAPPC11	Q7Z392	1133 aa		13.77	□□□□□ -0.21
GATM-208	ENST00000558537	ENOX1	Q8TC92	643 aa	Known RBP	13.77	□□□□□ -0.21
GATM-208	ENST00000558537	HERC2P3	Q9BVR0	1158 aa		13.77	□□□□□ -0.21
GATM-208	ENST00000558537	GPR62	Q9BZJ7	368 aa		13.77	□□□□□ -0.21
GATM-208	ENST00000558537	LMAN2L	Q9H0V9	348 aa		13.77	□□□□□ -0.21
GATM-208	ENST00000558537	THAP9	Q9H5L6	903 aa		13.77	□□□□□ -0.21
GATM-208	ENST00000558537	METTL14	Q9HCE5	456 aa	Known RBP	13.77	□□□□□ -0.21
GATM-208	ENST00000558537	PUF60	Q9UHX1	559 aa	Known RBP	13.77	□□□□□ -0.21
GATM-208	ENST00000558537	SIX4	Q9UIU6	781 aa		13.77	□□□□□ -0.21
GATM-208	ENST00000558537	PLXNA3	P51805	1871 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	GNA14	O95837	355 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	C4BPA	P04003	597 aa	Known RBP	13.76	□□□□□ -0.21
GATM-208	ENST00000558537	SOD2	P04179	222 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	KRT19	P08727	400 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	BRCC3	P46736	316 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	PPP3CA	Q08209	521 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.76	□□□□□ -0.21
GATM-208	ENST00000558537	TDRD10	Q5VZ19	366 aa	Known RBP	13.76	□□□□□ -0.21
GATM-208	ENST00000558537	C15orf39	Q6ZRI6	1047 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	TAS1R1	Q7RTX1	841 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	IRF2BP1	Q8IU81	584 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	VPS52	Q8N1B4	723 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	MRPL38	Q96DV4	380 aa	Known RBP	13.76	□□□□□ -0.21
GATM-208	ENST00000558537	CNOT6L	Q96LI5	555 aa	Known RBP	13.76	□□□□□ -0.21
GATM-208	ENST00000558537	ZNF560	Q96MR9	790 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	GUCD1	Q96NT3	240 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	ZBP1	Q9H171	429 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	TLR9	Q9NR96	1032 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	MTMR10	Q9NXD2	777 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	STK39	Q9UEW8	545 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	AGAP1	Q9UPQ3	857 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	NFE2L3	Q9Y4A8	694 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	NUB1	Q9Y5A7	615 aa		13.76	□□□□□ -0.21
GATM-208	ENST00000558537	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.75	□□□□□ -0.21
GATM-208	ENST00000558537		I3L4J1	428 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	SPTLC1	O15269	473 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	CSPG5	O95196	566 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	IRS1	P35568	1242 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	PNPLA4	P41247	253 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	GCLM	P48507	274 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	AARS	P49588	968 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
GATM-208	ENST00000558537	TAF6	P49848	677 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	LILRA4	P59901	499 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	ERVFC1	P60507	584 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	RBP5	P82980	135 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	ELAVL2	Q12926	359 aa	Known RBP	13.75	□□□□□ -0.21
GATM-208	ENST00000558537	BIRC3	Q13489	604 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	ADGRE1	Q14246	886 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	ZACN	Q401N2	412 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	TIGD5	Q53EQ6	642 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	TCERG1L	Q5VWI1	586 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	SV2A	Q7L0J3	742 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	TRIM59	Q8IWR1	403 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	LRRC52	Q8N7C0	313 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	MYLIP	Q8WY64	445 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	SLC35C1	Q96A29	364 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	GAS2L1	Q99501	681 aa	Predicted RBP	13.75	□□□□□ -0.21
GATM-208	ENST00000558537	CDX2	Q99626	313 aa	Predicted RBP	13.75	□□□□□ -0.21
GATM-208	ENST00000558537	BPIFA3	Q9BQP9	254 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	NAT10	Q9H0A0	1025 aa	Known RBP	13.75	□□□□□ -0.21
GATM-208	ENST00000558537	MMRN2	Q9H8L6	949 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	LMCD1	Q9NZU5	365 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	MYO7A	Q13402	2215 aa		13.75	□□□□□ -0.21
GATM-208	ENST00000558537	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.74	□□□□□ -0.21
GATM-208	ENST00000558537	FSCN2	O14926	492 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	TRAPPC3	O43617	180 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	STX10	O60499	249 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	PHACTR2	O75167	634 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	VNN1	O95497	513 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	CST3	P01034	146 aa	Predicted RBP	13.74	□□□□□ -0.21
GATM-208	ENST00000558537	CTSA	P10619	480 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	POU3F3	P20264	500 aa	Predicted RBP	13.74	□□□□□ -0.21
GATM-208	ENST00000558537	GTF2H1	P32780	548 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	GLUD2	P49448	558 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	MYL5	Q02045	173 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	PTPRO	Q16827	1216 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	USP41	Q3LFD5	358 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	SV2C	Q496J9	727 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	HSP90AA4P	Q58FG1	418 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	FAM171A1	Q5VUB5	890 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	TMC7	Q7Z402	723 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	FAM114A1	Q8IWE2	563 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	AOPEP	Q8N6M6	819 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	SUSD3	Q96L08	255 aa		13.74	□□□□□ -0.21
GATM-208	ENST00000558537	B3GALT6	Q96L58	329 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms