RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 AAK1Q2M2I8 961 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 C9orf57Q5W0N0 161 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 LMBRD2Q68DH5 695 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-205ENST00000558428 ISM2Q6H9L7 571 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 PRSS55Q6UWB4 352 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-205ENST00000558428 SLC9A9Q8IVB4 645 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 GPR65Q8IYL9 337 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 ATXN2LQ8WWM7 1075 aaKnown RBP13.37□□□□□ -0.27
SMAD3-205ENST00000558428 FNBP1Q96RU3 617 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 GTPBP4Q9BZE4 634 aaKnown RBP13.37□□□□□ -0.27
SMAD3-205ENST00000558428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMAD3-205ENST00000558428 DMAC2Q9NW81 257 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 MAN1B1Q9UKM7 699 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 BARX2Q9UMQ3 279 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-205ENST00000558428 TRAF3IP3Q9Y228 551 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 HCFC2Q9Y5Z7 792 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 MTCL1Q9Y4B5 1905 aaKnown RBP13.37□□□□□ -0.27
SMAD3-205ENST00000558428 TCF20Q9UGU0 1960 aaKnown RBP13.36□□□□□ -0.27
SMAD3-205ENST00000558428 PLXNA3P51805 1871 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 ANO9A1A5B4 782 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 TEX28O15482 410 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 ADH1AP07327 375 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 DLATP10515 647 aaKnown RBP13.36□□□□□ -0.27
SMAD3-205ENST00000558428 RPL17P18621 184 aaKnown RBP13.36□□□□□ -0.27
SMAD3-205ENST00000558428 LTBRP36941 435 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 MRPS5P82675 430 aaKnown RBP13.36□□□□□ -0.27
SMAD3-205ENST00000558428 CREMQ03060 361 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 DLX2Q07687 328 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-205ENST00000558428 MYBPC2Q14324 1141 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 PSMD5Q16401 504 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 COBLL1Q53SF7 1204 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 CEP135Q66GS9 1140 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 PDXDC1Q6P996 788 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 DSTYKQ6XUX3 929 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 PPFIBP1Q86W92 1011 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 GLYCTKQ8IVS8 523 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 VN1R2Q8NFZ6 395 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 LNX1Q8TBB1 728 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-205ENST00000558428 PIK3R5Q8WYR1 880 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 CASP10Q92851 521 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 ANKRD36BP1Q96IX9 119 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 FAM84AQ96KN4 292 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 SUSD3Q96L08 255 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 MTMR12Q9C0I1 747 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 RXFP1Q9HBX9 757 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 FNIP2Q9P278 1114 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 VCANP13611 3396 aa13.36□□□□□ -0.27
SMAD3-205ENST00000558428 BIN1O00499 593 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 PIRO00625 290 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 SYN3O14994 580 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 TNNC2P02585 160 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 ITGB3P05106 788 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 EPCAMP16422 314 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 TNNI1P19237 187 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 NR2F2P24468 414 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 AARSP49588 968 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMAD3-205ENST00000558428 CASP4P49662 377 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 CLCN4P51793 760 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 LILRA4P59901 499 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 STIM1Q13586 685 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 KCNC3Q14003 757 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 PSMD6Q15008 389 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 CLUL1Q15846 466 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 LEXMQ3ZCV2 418 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 ZCWPW2Q504Y3 356 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 ANKS3Q6ZW76 656 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 WDR49Q8IV35 697 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 CSGALNACT2Q8N6G5 542 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 C1orf127Q8N9H9 656 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 TMEM174Q8WUU8 243 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 CGRRF1Q99675 332 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 INTS13Q9NVM9 706 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 CLEC1BQ9P126 229 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 KIAA1468Q9P260 1216 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 PCDHB8Q9UN66 801 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 FRMD4BQ9Y2L6 1034 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 C5orf42Q9H799 3197 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 PTPRJQ12913 1337 aa13.35□□□□□ -0.27
SMAD3-205ENST00000558428 M0QZQ0 153 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 GLUD1P00367 558 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 KRT19P08727 400 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 PAX3P23760 479 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 RPL13P26373 211 aaKnown RBP13.34□□□□□ -0.27
SMAD3-205ENST00000558428 POLR2BP30876 1174 aaKnown RBP13.34□□□□□ -0.27
SMAD3-205ENST00000558428 TAF6P49848 677 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 KCNQ1P51787 676 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 ADAM9Q13443 819 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 MORC3Q14149 939 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 NFIL3Q16649 462 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 DUOXA2Q1HG44 320 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 EDRF1Q3B7T1 1238 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
SMAD3-205ENST00000558428 ANKRD54Q6NXT1 300 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 TMEM184AQ6ZMB5 413 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 PALB2Q86YC2 1186 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 ADSSL1Q8N142 457 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 APPL2Q8NEU8 664 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 OR5B17Q8NGF7 314 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 SLC22A17Q8WUG5 538 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms