RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CUL4BQ13620 913 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 TMEM132DQ14C87 1099 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 KNOP1Q1ED39 458 aaKnown RBP9.2□□□□□ -0.94
TPM1-213ENST00000558400 UVSSAQ2YD98 709 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 LLGL2Q6P1M3 1020 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 ARMCX5Q6P1M9 558 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 SYCE2Q6PIF2 218 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 EPM2AIP1Q7L775 607 aaPredicted RBP9.2□□□□□ -0.94
TPM1-213ENST00000558400 ADHFE1Q8IWW8 467 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 GJD3Q8N144 294 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 VN1R2Q8NFZ6 395 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 LNX1Q8TBB1 728 aaPredicted RBP9.2□□□□□ -0.94
TPM1-213ENST00000558400 SUSD3Q96L08 255 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 RHOBTB2Q9BYZ6 727 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 GTPBP4Q9BZE4 634 aaKnown RBP9.2□□□□□ -0.94
TPM1-213ENST00000558400 BLZF1Q9H2G9 400 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 EXOC1Q9NV70 894 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 BACE2Q9Y5Z0 518 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 WDFY4Q6ZS81 3184 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.19□□□□□ -0.94
TPM1-213ENST00000558400 F8W810 466 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 IL9P15248 144 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 MCM4P33991 863 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 RAB33AQ14088 237 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 CBX2Q14781 532 aaPredicted RBP9.19□□□□□ -0.94
TPM1-213ENST00000558400 CLUL1Q15846 466 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 PSMD5Q16401 504 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 BMT2Q1RMZ1 405 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 RTP2Q5QGT7 225 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 ZBTB41Q5SVQ8 909 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 JADE1Q6IE81 842 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 LILRA6Q6PI73 481 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 CD300LGQ6UXG3 332 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 CRELD2Q6UXH1 353 aaPredicted RBP9.19□□□□□ -0.94
TPM1-213ENST00000558400 KRBA2Q6ZNG9 492 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 C15orf39Q6ZRI6 1047 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 GPD1LQ8N335 351 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 CMASQ8NFW8 434 aaPredicted RBP9.19□□□□□ -0.94
TPM1-213ENST00000558400 HASPINQ8TF76 798 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 SUSD6Q92537 303 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 C18orf25Q96B23 403 aaPredicted RBP9.19□□□□□ -0.94
TPM1-213ENST00000558400 TIGD1Q96MW7 591 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 CLSTN3Q9BQT9 956 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 FAM213AQ9BRX8 229 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 PHF7Q9BWX1 381 aaPredicted RBP9.19□□□□□ -0.94
TPM1-213ENST00000558400 SFXN1Q9H9B4 322 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 GOLGA2P5Q9HBQ8 144 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 GDPD2Q9HCC8 539 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 SLC39A2Q9NP94 309 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 DPP3Q9NY33 737 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 CHMP5Q9NZZ3 219 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 CACNG4Q9UBN1 327 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 MAFFQ9ULX9 164 aa9.19□□□□□ -0.94
TPM1-213ENST00000558400 R3HCC1Q9Y3T6 440 aaKnown RBP9.19□□□□□ -0.94
TPM1-213ENST00000558400 USP15Q9Y4E8 981 aaPredicted RBP9.19□□□□□ -0.94
TPM1-213ENST00000558400 TISP43B9A030 160 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 M0QZQ0 153 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 PIRO00625 290 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 MEFVO15553 781 aaPredicted RBP9.18□□□□□ -0.94
TPM1-213ENST00000558400 TGM5O43548 720 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 KLRC4O43908 158 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 PRPF40AO75400 957 aaKnown RBP9.18□□□□□ -0.94
TPM1-213ENST00000558400 RHOBTB3O94955 611 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 RPN1P04843 607 aaKnown RBP9.18□□□□□ -0.94
TPM1-213ENST00000558400 EPCAMP16422 314 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 SSTR3P32745 418 aaPredicted RBP9.18□□□□□ -0.94
TPM1-213ENST00000558400 PNPLA4P41247 253 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 BRCC3P46736 316 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 LILRA4P59901 499 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 RBM10P98175 930 aaKnown RBP9.18□□□□□ -0.94
TPM1-213ENST00000558400 FAM160A1Q05DH4 1040 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 SPAG1Q07617 926 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 MRPL58Q14197 206 aaKnown RBP9.18□□□□□ -0.94
TPM1-213ENST00000558400 MYBPC2Q14324 1141 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 KCNB1Q14721 858 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 KMT5BQ4FZB7 885 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 PRSS55Q6UWB4 352 aaPredicted RBP9.18□□□□□ -0.94
TPM1-213ENST00000558400 GPR149Q86SP6 731 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 USP37Q86T82 979 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 PALB2Q86YC2 1186 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 BRSK2Q8IWQ3 736 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 C12orf56Q8IXR9 622 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 ELOA2Q8IYF1 753 aaPredicted RBP9.18□□□□□ -0.94
TPM1-213ENST00000558400 XXYLT1Q8NBI6 393 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 KREMEN2Q8NCW0 462 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 ZNF461Q8TAF7 563 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 TMEM174Q8WUU8 243 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 SCFD1Q8WVM8 642 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 HPS3Q969F9 1004 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 CHAMP1Q96JM3 812 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 B3GALT6Q96L58 329 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 CBWD1Q9BRT8 395 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 PLXNA4Q9HCM2 1894 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 ZDHHC7Q9NXF8 308 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 RBAKQ9NYW8 714 aaPredicted RBP9.18□□□□□ -0.94
TPM1-213ENST00000558400 MTRRQ9UBK8 725 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 DSEQ9UL01 958 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 PCDHB8Q9UN66 801 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 NR2E1Q9Y466 385 aa9.18□□□□□ -0.94
TPM1-213ENST00000558400 TDRD15B5MCY1 1934 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms