RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 FLCNQ8NFG4 579 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 ING5Q8WYH8 240 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 SNX21Q969T3 373 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 KCNH6Q9H252 994 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 CYP4F11Q9HBI6 524 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 CPSF3Q9UKF6 684 aaKnown RBP12.96□□□□□ -0.33
HERC1-202ENST00000558324 NUMBLQ9Y6R0 609 aa12.96□□□□□ -0.33
HERC1-202ENST00000558324 PPEF2O14830 753 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 SPTLC2O15270 562 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
HERC1-202ENST00000558324 GCNT3O95395 438 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 LRG1P02750 347 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 CPB1P15086 417 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 LRPAP1P30533 357 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 ABCD1P33897 745 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 KCNA1Q09470 495 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 UVSSAQ2YD98 709 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 PABPC1LQ4VXU2 614 aaKnown RBP12.95□□□□□ -0.34
HERC1-202ENST00000558324 DSTYKQ6XUX3 929 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 ZNF720Q7Z2F6 126 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 SIX5Q8N196 739 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 TMEM105Q8N8V8 129 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 LINC00301Q8NCQ3 95 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 APPL2Q8NEU8 664 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 ZNF461Q8TAF7 563 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 ITFG1Q8TB96 612 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 POMGNT1Q8WZA1 660 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 FGF13Q92913 245 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 DNAJC19Q96DA6 116 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 ZNF396Q96N95 335 aaPredicted RBP12.95□□□□□ -0.34
HERC1-202ENST00000558324 DNMT3BQ9UBC3 853 aaKnown RBP12.95□□□□□ -0.34
HERC1-202ENST00000558324 AGO2Q9UKV8 859 aaKnown RBP12.95□□□□□ -0.34
HERC1-202ENST00000558324 CDH7Q9ULB5 785 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 GTF3C3Q9Y5Q9 886 aa12.95□□□□□ -0.34
HERC1-202ENST00000558324 MTCL1Q9Y4B5 1905 aaKnown RBP12.95□□□□□ -0.34
HERC1-202ENST00000558324 PDCD11Q14690 1871 aaKnown RBP12.95□□□□□ -0.34
HERC1-202ENST00000558324 ZNF318Q5VUA4 2279 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 TBC1D4O60343 1298 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 ABLIM3O94929 683 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 SEC24AO95486 1093 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 GAP43P17677 238 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 CYP3A5P20815 502 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 CASP5P51878 434 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 YWHAHQ04917 246 aaPredicted RBP12.94□□□□□ -0.34
HERC1-202ENST00000558324 HTR4Q13639 388 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 MRPL58Q14197 206 aaKnown RBP12.94□□□□□ -0.34
HERC1-202ENST00000558324 TMEM132DQ14C87 1099 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 ZBTB6Q15916 424 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 SPATA1Q5VX52 437 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 SLFN12LQ6IEE8 588 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 USP37Q86T82 979 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 SLC44A3Q8N4M1 653 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 BEST2Q8NFU1 509 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 HVCN1Q96D96 273 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 FGFBP2Q9BYJ0 223 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 ST6GALNAC4Q9H4F1 302 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 SEL1LQ9UBV2 794 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 CA14Q9ULX7 337 aa12.94□□□□□ -0.34
HERC1-202ENST00000558324 ANHXE9PGG2 379 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 M0QZQ0 153 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 PPP1R37O75864 691 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 RHOP08100 348 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 OR4Q2P0C623 313 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 ATF2P15336 505 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 RFX1P22670 979 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 HOXD11P31277 338 aaPredicted RBP12.93□□□□□ -0.34
HERC1-202ENST00000558324 PTPN5P54829 565 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 ADCY1Q08828 1119 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 TCF15Q12870 199 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 SLC5A9Q2M3M2 681 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 L1TD1Q5T7N2 865 aaKnown RBP12.93□□□□□ -0.34
HERC1-202ENST00000558324 CWF19L1Q69YN2 538 aaKnown RBP12.93□□□□□ -0.34
HERC1-202ENST00000558324 ASTLQ6HA08 431 aaPredicted RBP12.93□□□□□ -0.34
HERC1-202ENST00000558324 PARM1Q6UWI2 310 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 ALYREFQ86V81 257 aaKnown RBP12.93□□□□□ -0.34
HERC1-202ENST00000558324 SYCP3Q8IZU3 236 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 NOC3LQ8WTT2 800 aaKnown RBP12.93□□□□□ -0.34
HERC1-202ENST00000558324 FGF14Q92915 247 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 DHX58Q96C10 678 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 SAAL1Q96ER3 474 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 PGLYRP2Q96PD5 576 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 ACCSQ96QU6 501 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 PHOX2BQ99453 314 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 PRRX2Q99811 253 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 CORO1BQ9BR76 489 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 RPP25Q9BUL9 199 aaKnown RBP12.93□□□□□ -0.34
HERC1-202ENST00000558324 PANK4Q9NVE7 773 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 FAM86C1Q9NVL1 165 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 EXOC7Q9UPT5 735 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 MRPS23Q9Y3D9 190 aaKnown RBP12.93□□□□□ -0.34
HERC1-202ENST00000558324 INSL5Q9Y5Q6 135 aa12.93□□□□□ -0.34
HERC1-202ENST00000558324 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.93□□□□□ -0.34
HERC1-202ENST00000558324 MORC2Q9Y6X9 1032 aaPredicted RBP12.93□□□□□ -0.34
HERC1-202ENST00000558324 MYH15Q9Y2K3 1946 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 MYO10Q9HD67 2058 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 ARHGEF37A1IGU5 675 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 STK25O00506 426 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 SPTLC1O15269 473 aa12.92□□□□□ -0.34
HERC1-202ENST00000558324 PPP6R2O75170 966 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms