RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 ZNF689Q96CS4 500 aaPredicted RBP8.62□□□□□ -1.03
RTF1-205ENST00000558298 SAMD11Q96NU1 681 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 RAD9AQ99638 391 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 FDXACB1Q9BRP7 624 aaPredicted RBP8.62□□□□□ -1.03
RTF1-205ENST00000558298 CCDC113Q9H0I3 377 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 POLR3FQ9H1D9 316 aaPredicted RBP8.62□□□□□ -1.03
RTF1-205ENST00000558298 FZD8Q9H461 694 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 ST6GALNAC4Q9H4F1 302 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 PRDM12Q9H4Q4 367 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 CDHR5Q9HBB8 845 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 SLC40A1Q9NP59 571 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 TMEM161AQ9NX61 479 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 STIM2Q9P246 746 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 ARHGAP28Q9P2N2 729 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 CTNNAL1Q9UBT7 734 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 CORO1CQ9ULV4 474 aaPredicted RBP8.62□□□□□ -1.03
RTF1-205ENST00000558298 INSL6Q9Y581 213 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 PCDHA5Q9Y5H7 936 aa8.62□□□□□ -1.03
RTF1-205ENST00000558298 EPN1Q9Y6I3 576 aaPredicted RBP8.62□□□□□ -1.03
RTF1-205ENST00000558298 PDCD11Q14690 1871 aaKnown RBP8.62□□□□□ -1.03
RTF1-205ENST00000558298 MUC3AQ02505 3323 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 CNTNAP2Q9UHC6 1331 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 GRID2IPA4D2P6 1211 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 SOWAHDA6NJG2 315 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 E7ENQ6 273 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 E9PMD0 336 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 HOXA2O43364 376 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 DGKIO75912 1065 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 SNUPNO95149 360 aaKnown RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 EOMESO95936 686 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 PAEPP09466 180 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 PLA2G4BP0C869 781 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 STAG3L1P0CL83 205 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 MAPTP10636 758 aaKnown RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 FOSL2P15408 326 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 PLCG1P19174 1290 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 NR1D1P20393 614 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 EEF1GP26641 437 aaKnown RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 CDC25AP30304 524 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 MDH1P40925 334 aaKnown RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 ERVK-21P61565 698 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 TMEM62Q0P6H9 643 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 KIF5AQ12840 1032 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 CCDC181Q5TID7 509 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 RAD9BQ6WBX8 426 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 ZNF598Q86UK7 904 aaKnown RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 NLRP14Q86W24 1093 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 MFN1Q8IWA4 741 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 CMTR2Q8IYT2 770 aaKnown RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 CACNA2D3Q8IZS8 1091 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 MAFAQ8NHW3 353 aaPredicted RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 ASAP3Q8TDY4 903 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 LRRC15Q8TF66 581 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 ZNF473Q8WTR7 871 aaKnown RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 CLP1Q92989 425 aaKnown RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 TMEM143Q96AN5 459 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 CDK5RAP3Q96JB5 506 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 NLRP4Q96MN2 994 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 GDAP1L1Q96MZ0 367 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 SPAG5Q96R06 1193 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 SH2D3AQ9BRG2 576 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 DESI2Q9BSY9 194 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 RUSC1Q9BVN2 902 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 EPC1Q9H2F5 836 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 TMEM134Q9H6X4 195 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 EBF2Q9HAK2 575 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 PRMT7Q9NVM4 692 aaPredicted RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 INTS13Q9NVM9 706 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 KBTBD4Q9NVX7 518 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 NOP53Q9NZM5 478 aaKnown RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 SEL1LQ9UBV2 794 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 LUC7L2Q9Y383 392 aaKnown RBP8.61□□□□□ -1.03
RTF1-205ENST00000558298 RWDD3Q9Y3V2 267 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 CITO14578 2027 aa8.61□□□□□ -1.03
RTF1-205ENST00000558298 ADGRA3Q8IWK6 1321 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 PRRC2BQ5JSZ5 2229 aaKnown RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 C5orf67F2Z3F1 127 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 ACKR2O00590 384 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 CES2O00748 559 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 TLL1O43897 1013 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 MGRN1O60291 552 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 MGEA5O60502 916 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 TSPAN1O60635 241 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 FESP07332 822 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 PLS3P13797 630 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 PECAM1P16284 738 aaPredicted RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 MARCKSP29966 332 aaPredicted RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 HOXA11P31270 313 aaPredicted RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 DMP1Q13316 513 aaPredicted RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 BIRC2Q13490 618 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 PNOCQ13519 176 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 ITIH4Q14624 930 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 NAA25Q14CX7 972 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 SPA17Q15506 151 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 CLUL1Q15846 466 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 IFI16Q16666 785 aaKnown RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 CMPK2Q5EBM0 449 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 ARSHQ5FYA8 562 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 FIGNQ5HY92 759 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 CCDC122Q5T0U0 273 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms