RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 GLP2RO95838 553 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 NR3C1P04150 777 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 ITGB3P05106 788 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 SPATA31D3P0C874 917 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 ODC1P11926 461 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 RPL13P26373 211 aaKnown RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 LRPAP1P30533 357 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 POLR2BP30876 1174 aaKnown RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 ELF1P32519 619 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 TAF6P49848 677 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 POU5F1Q01860 360 aaKnown RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 DLX2Q07687 328 aaPredicted RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 BFSP1Q12934 665 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 SMAD4Q13485 552 aaKnown RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 SNW1Q13573 536 aaKnown RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 SV2CQ496J9 727 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 CTXN3Q4LDR2 81 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 SPATA1Q5VX52 437 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 LMBRD2Q68DH5 695 aaPredicted RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 ISM2Q6H9L7 571 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 ZNF280DQ6N043 979 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 CRELD2Q6UXH1 353 aaPredicted RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 SPATA31D4Q6ZUB0 917 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 METTL23Q86XA0 190 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 NT5DC4Q86YG4 428 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 CBWD2Q8IUF1 395 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 SMYD4Q8IYR2 804 aaPredicted RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 CSGALNACT2Q8N6G5 542 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 C3orf58Q8NDZ4 430 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 ZSWIM2Q8NEG5 633 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 ADAMTS19Q8TE59 1207 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 FBXL18Q96ME1 805 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 GSDMAQ96QA5 445 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 UHRF1Q96T88 793 aaPredicted RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 GTPBP4Q9BZE4 634 aaKnown RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 MTMR12Q9C0I1 747 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 SFXN1Q9H9B4 322 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 PIDD1Q9HB75 910 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 PDE11AQ9HCR9 933 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 MAN1C1Q9NR34 630 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 IRAK3Q9Y616 596 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 CDY1Q9Y6F8 540 aa9.71□□□□□ -0.86
SPG11-207ENST00000558138 COL6A3P12111 3177 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 PDXKO00764 312 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 PPEF2O14830 753 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 SYN3O14994 580 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 TGFB1I1O43294 461 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 KRT13P13646 458 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 CPB1P15086 417 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 IL9P15248 144 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 HOXB8P17481 243 aaPredicted RBP9.7□□□□□ -0.86
SPG11-207ENST00000558138 HOXD13P35453 343 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 PNPLA4P41247 253 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 CLCN4P51793 760 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 YWHAHQ04917 246 aaPredicted RBP9.7□□□□□ -0.86
SPG11-207ENST00000558138 MYO1EQ12965 1108 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 BIRC3Q13489 604 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 TRPC3Q13507 836 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 CAMK4Q16566 473 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 DUOXA2Q1HG44 320 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 CTC1Q2NKJ3 1217 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 VARS2Q5ST30 1063 aaKnown RBP9.7□□□□□ -0.86
SPG11-207ENST00000558138 ZNF658Q5TYW1 1059 aaPredicted RBP9.7□□□□□ -0.86
SPG11-207ENST00000558138 KIAA0319Q5VV43 1072 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 C9orf57Q5W0N0 161 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 EFCAB13Q8IY85 973 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 RNF168Q8IYW5 571 aaPredicted RBP9.7□□□□□ -0.86
SPG11-207ENST00000558138 TMEM130Q8N3G9 435 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 ENGASEQ8NFI3 743 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 VN1R2Q8NFZ6 395 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.7□□□□□ -0.86
SPG11-207ENST00000558138 PIK3R5Q8WYR1 880 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 SUSD3Q96L08 255 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 CHST7Q9NS84 486 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 CLEC1BQ9P126 229 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 FNIP2Q9P278 1114 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 ITGA11Q9UKX5 1188 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 PCDHB8Q9UN66 801 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 POLIQ9UNA4 740 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 AGAP1Q9UPQ3 857 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 USP15Q9Y4E8 981 aaPredicted RBP9.7□□□□□ -0.86
SPG11-207ENST00000558138 PCDHA5Q9Y5H7 936 aa9.7□□□□□ -0.86
SPG11-207ENST00000558138 TIMM13Q9Y5L4 95 aaPredicted RBP9.7□□□□□ -0.86
SPG11-207ENST00000558138 BIN1O00499 593 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 CYB561D2O14569 222 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 PSMA7O14818 248 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 MBTPS2O43462 519 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 TGM5O43548 720 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 ADRB2P07550 413 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 FGFR3P22607 806 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 SP100P23497 879 aaPredicted RBP9.69□□□□□ -0.86
SPG11-207ENST00000558138 PAX3P23760 479 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 NR2F2P24468 414 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 IGFBP6P24592 240 aaPredicted RBP9.69□□□□□ -0.86
SPG11-207ENST00000558138 OR1D2P34982 312 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 LTBRP36941 435 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 RBP5P82980 135 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 CYP24A1Q07973 514 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 ZBTB6Q15916 424 aa9.69□□□□□ -0.86
SPG11-207ENST00000558138 PPM1LQ5SGD2 360 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms