RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 PLXNA3P51805 1871 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 EYSQ5T1H1 3165 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 SPTBN5Q9NRC6 3674 aaKnown RBP9.79□□□□□ -0.84
CHD8-214ENST00000557727 RFXAPO00287 272 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 AKAP3O75969 853 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 CCNE1P24864 410 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 CYP2J2P51589 502 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 GUCY2FP51841 1108 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 BCAR1P56945 870 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 CLDN10P78369 228 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 CYP24A1Q07973 514 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 TUSC3Q13454 348 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 NFKBIBQ15653 356 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 SNRNP35Q16560 246 aaKnown RBP9.79□□□□□ -0.84
CHD8-214ENST00000557727 KCNT2Q6UVM3 1135 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 HS2ST1Q7LGA3 356 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 HACE1Q8IYU2 909 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 ABI1Q8IZP0 508 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 XXYLT1Q8NBI6 393 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 C3orf58Q8NDZ4 430 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 GOLGA5Q8TBA6 731 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 P2RX5Q93086 422 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 DHTKD1Q96HY7 919 aaPredicted RBP9.79□□□□□ -0.84
CHD8-214ENST00000557727 GUCD1Q96NT3 240 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 TGS1Q96RS0 853 aaKnown RBP9.79□□□□□ -0.84
CHD8-214ENST00000557727 FUCA2Q9BTY2 467 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 GTPBP4Q9BZE4 634 aaKnown RBP9.79□□□□□ -0.84
CHD8-214ENST00000557727 CERS4Q9HA82 394 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 SLC28A3Q9HAS3 691 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 PDE11AQ9HCR9 933 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 TOPORSQ9NS56 1045 aaPredicted RBP9.79□□□□□ -0.84
CHD8-214ENST00000557727 KANSL3Q9P2N6 904 aa9.79□□□□□ -0.84
CHD8-214ENST00000557727 MTCL1Q9Y4B5 1905 aaKnown RBP9.79□□□□□ -0.84
CHD8-214ENST00000557727 TTC24A2A3L6 582 aaPredicted RBP9.78□□□□□ -0.84
CHD8-214ENST00000557727 NT5C1B-RDH14C9J2C7 533 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 H3BNC9 293 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 NRP1O14786 923 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 PPEF2O14830 753 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 MAPK13O15264 365 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 GRM6O15303 877 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 ZC3H11AO75152 810 aaKnown RBP eCLIP9.78□□□□□ -0.84
CHD8-214ENST00000557727 LDHAP00338 332 aaKnown RBP9.78□□□□□ -0.84
CHD8-214ENST00000557727 THP07101 528 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 LAG3P18627 525 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 NR2F2P24468 414 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 LRPAP1P30533 357 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 MATR3P43243 847 aaKnown RBP eCLIP9.78□□□□□ -0.84
CHD8-214ENST00000557727 YARSP54577 528 aaKnown RBP9.78□□□□□ -0.84
CHD8-214ENST00000557727 NLRP12P59046 1061 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 LRRC63Q05C16 580 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 ADGRE1Q14246 886 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 PSMD6Q15008 389 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 UPP1Q16831 310 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 SPATA1Q5VX52 437 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 JADE1Q6IE81 842 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 CAVIN1Q6NZI2 390 aaKnown RBP9.78□□□□□ -0.84
CHD8-214ENST00000557727 KLHL23Q8NBE8 558 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 URGCPQ8TCY9 931 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 GDPD5Q8WTR4 605 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 NELFBQ8WX92 580 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 RABGGTAQ92696 567 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 EEF2KMTQ96G04 330 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 IGSF21Q96ID5 467 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 SAMD11Q96NU1 681 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 RPS6KC1Q96S38 1066 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 TMEM175Q9BSA9 504 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 PLVAPQ9BX97 442 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 ASB7Q9H672 318 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 RPF1Q9H9Y2 349 aaKnown RBP9.78□□□□□ -0.84
CHD8-214ENST00000557727 RBAKQ9NYW8 714 aaPredicted RBP9.78□□□□□ -0.84
CHD8-214ENST00000557727 SIX4Q9UIU6 781 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 MTUS1Q9ULD2 1270 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 CTNND2Q9UQB3 1225 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 DERAQ9Y315 318 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 C2CD2Q9Y426 696 aa9.78□□□□□ -0.84
CHD8-214ENST00000557727 ANO9A1A5B4 782 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 CASTOR2A6NHX0 329 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 ZNF233A6NK53 670 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 TMEM189-UBE2V1I3L0A0 370 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 PSMA7O14818 248 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 CALUO43852 315 aaPredicted RBP9.77□□□□□ -0.85
CHD8-214ENST00000557727 KIF20AO95235 890 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 KIF4AO95239 1232 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 IL18RAPO95256 599 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 RB1P06400 928 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 POU3F3P20264 500 aaPredicted RBP9.77□□□□□ -0.85
CHD8-214ENST00000557727 CYP3A5P20815 502 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 CTNNB1P35222 781 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 CLCNKBP51801 687 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 USP46P62068 366 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 DLG4P78352 724 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 PLCB3Q01970 1234 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 RNASELQ05823 741 aaKnown RBP9.77□□□□□ -0.85
CHD8-214ENST00000557727 PPP2R3AQ06190 1150 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 PAK1Q13153 545 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 C11orf57Q6ZUT1 292 aaPredicted RBP9.77□□□□□ -0.85
CHD8-214ENST00000557727 IRF2BP1Q8IU81 584 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 CD302Q8IX05 232 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 C1orf127Q8N9H9 656 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 MLKLQ8NB16 471 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms