RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ASMTLO95671 621 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 MAN1A1P33908 653 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 NCKAP1LP55160 1127 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 ZFYVE27Q5T4F4 411 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 SPOPLQ6IQ16 392 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 SLC39A4Q6P5W5 647 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 CCDC89Q8N998 374 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 TMEM161BQ8NDZ6 487 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 MICAL1Q8TDZ2 1067 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 CHURC1Q8WUH1 139 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 MAIP1Q8WWC4 291 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 OSBPL8Q9BZF1 889 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 HOMER2Q9NSB8 354 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 EURLQ9NYK6 297 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 ZMYND8Q9ULU4 1186 aaPredicted RBP12.09□□□□□ -0.47
SRP54-213ENST00000556994 ASTN2O75129 1339 aaPredicted RBP12.09□□□□□ -0.47
SRP54-213ENST00000556994 SLX4Q8IY92 1834 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 NRXN2Q9P2S2 1712 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 CCDC189A1A4V9 331 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 MAPK13O15264 365 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 PMM2O15305 246 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 KRT15P19012 456 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 ALDH1B1P30837 517 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 RPA3P35244 121 aaPredicted RBP12.09□□□□□ -0.47
SRP54-213ENST00000556994 NSFP46459 744 aaKnown RBP12.09□□□□□ -0.47
SRP54-213ENST00000556994 NPTX2P47972 431 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 POLGP54098 1239 aaPredicted RBP12.09□□□□□ -0.47
SRP54-213ENST00000556994 TRAF1Q13077 416 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 CCNG2Q16589 344 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 TKFCQ3LXA3 575 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 PCNX4Q63HM2 1172 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 TRABD2AQ86V40 505 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 CPXCR1Q8N123 301 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 BSNDQ8WZ55 320 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 MRIQ9BWK5 157 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 KIAA1586Q9HCI6 787 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 AGO4Q9HCK5 861 aaKnown RBP12.09□□□□□ -0.47
SRP54-213ENST00000556994 SERPINA10Q9UK55 444 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 CCPG1Q9ULG6 757 aa12.09□□□□□ -0.47
SRP54-213ENST00000556994 ATRNL1Q5VV63 1379 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 ATP9AO75110 1047 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 CBX6O95503 412 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 TCF4P15884 667 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 KLRC2P26717 231 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 DSG3P32926 999 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 MRPS9P82933 396 aaKnown RBP12.08□□□□□ -0.48
SRP54-213ENST00000556994 CENPCQ03188 943 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 ACVR2BQ13705 512 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 SETDB1Q15047 1291 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 TRIM68Q6AZZ1 485 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 CDAN1Q8IWY9 1227 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 TMEM174Q8WUU8 243 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 ZNF516Q92618 1163 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 HAUS1Q96CS2 278 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 LRRC37BQ96QE4 947 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 FAM213AQ9BRX8 229 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 TRABDQ9H4I3 376 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 DNPEPQ9ULA0 475 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 A0A1W2PPM1 405 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 BANF1O75531 89 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 PROSCO94903 275 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 GM2AP17900 193 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 SLC1A1P43005 524 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 CCNHP51946 323 aaPredicted RBP12.08□□□□□ -0.48
SRP54-213ENST00000556994 CYP24A1Q07973 514 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 MTMR1Q13613 665 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 TAF11Q15544 211 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 SLC1A5Q15758 541 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 AOC3Q16853 763 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 GRAMD1AQ96CP6 724 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 VPS37BQ9H9H4 285 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 KMT5AQ9NQR1 393 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 BATF3Q9NR55 127 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 TXLNGQ9NUQ3 528 aa12.08□□□□□ -0.48
SRP54-213ENST00000556994 ANKRD31Q8N7Z5 1873 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 H0Y3Z8 333 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 GOLGA8SH3BPF8 625 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 GOLGA8MH3BSY2 632 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 ENTPD3O75355 529 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 T-ENOLP0DO92 83 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 FGFR1P11362 822 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 MYCLP12524 364 aaPredicted RBP12.07□□□□□ -0.48
SRP54-213ENST00000556994 ATF7P17544 494 aaPredicted RBP12.07□□□□□ -0.48
SRP54-213ENST00000556994 EIF2AK2P19525 551 aaKnown RBP12.07□□□□□ -0.48
SRP54-213ENST00000556994 CA4P22748 312 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 EPHB2P29323 1055 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 ABL2P42684 1182 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 LONP2Q86WA8 852 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 MAP4K3Q8IVH8 894 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 RHOT1Q8IXI2 618 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 DENND1AQ8TEH3 1009 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 CNKSR1Q969H4 720 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 ACSF2Q96CM8 615 aaPredicted RBP12.07□□□□□ -0.48
SRP54-213ENST00000556994 MFSD14AQ96MC6 490 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 RAB3IPQ96QF0 476 aaPredicted RBP12.07□□□□□ -0.48
SRP54-213ENST00000556994 IWS1Q96ST2 819 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 ST6GALNAC4Q9H4F1 302 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 EXOC7Q9UPT5 735 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms