RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 ROR1Q01973 937 aa24.65■■□□□ 1.54
TMEM260-214ENST00000556975 GRASPQ7Z6J2 395 aaPredicted RBP24.65■■□□□ 1.54
TMEM260-214ENST00000556975 APPL2Q8NEU8 664 aa24.65■■□□□ 1.54
TMEM260-214ENST00000556975 PRRX2Q99811 253 aa24.65■■□□□ 1.54
TMEM260-214ENST00000556975 PANK2Q9BZ23 570 aa24.65■■□□□ 1.54
TMEM260-214ENST00000556975 PCDHB8Q9UN66 801 aa24.65■■□□□ 1.54
TMEM260-214ENST00000556975 DUSP12Q9UNI6 340 aa24.65■■□□□ 1.54
TMEM260-214ENST00000556975 MYH15Q9Y2K3 1946 aa24.65■■□□□ 1.54
TMEM260-214ENST00000556975 FRMD3A2A2Y4 597 aa24.64■■□□□ 1.54
TMEM260-214ENST00000556975 M0QZQ0 153 aa24.64■■□□□ 1.54
TMEM260-214ENST00000556975 YEATS4O95619 227 aa24.64■■□□□ 1.54
TMEM260-214ENST00000556975 FSHRP23945 695 aa24.64■■□□□ 1.54
TMEM260-214ENST00000556975 AARSP49588 968 aaKnown RBP eCLIP24.64■■□□□ 1.54
TMEM260-214ENST00000556975 MRE11P49959 708 aa24.64■■□□□ 1.54
TMEM260-214ENST00000556975 SPATA1Q5VX52 437 aa24.64■■□□□ 1.54
TMEM260-214ENST00000556975 ADALQ6DHV7 355 aa24.64■■□□□ 1.54
TMEM260-214ENST00000556975 MRPL44Q9H9J2 332 aaKnown RBP24.64■■□□□ 1.54
TMEM260-214ENST00000556975 OLFML3Q9NRN5 406 aa24.64■■□□□ 1.54
TMEM260-214ENST00000556975 TFIP11Q9UBB9 837 aaKnown RBP24.64■■□□□ 1.54
TMEM260-214ENST00000556975 FBXL5Q9UKA1 691 aa24.64■■□□□ 1.54
TMEM260-214ENST00000556975 DERAQ9Y315 318 aa24.64■■□□□ 1.54
TMEM260-214ENST00000556975 ARHGEF37A1IGU5 675 aa24.63■■□□□ 1.53
TMEM260-214ENST00000556975 WDR27A2RRH5 827 aa24.63■■□□□ 1.53
TMEM260-214ENST00000556975 CCL16O15467 120 aa24.63■■□□□ 1.53
TMEM260-214ENST00000556975 PDGFBP01127 241 aaPredicted RBP24.63■■□□□ 1.53
TMEM260-214ENST00000556975 ATF2P15336 505 aa24.63■■□□□ 1.53
TMEM260-214ENST00000556975 AVPR2P30518 371 aa24.63■■□□□ 1.53
TMEM260-214ENST00000556975 GET4Q7L5D6 327 aaPredicted RBP24.63■■□□□ 1.53
TMEM260-214ENST00000556975 ASB7Q9H672 318 aa24.63■■□□□ 1.53
TMEM260-214ENST00000556975 AGO2Q9UKV8 859 aaKnown RBP24.63■■□□□ 1.53
TMEM260-214ENST00000556975 KMT2EQ8IZD2 1858 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 TISP43B9A030 160 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 ANHXE9PGG2 379 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 PAX3P23760 479 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 POSTNQ15063 836 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 CTXN3Q4LDR2 81 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 IER5LQ5T953 404 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 TPGS2Q68CL5 300 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 JADE1Q6IE81 842 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 ZNF280DQ6N043 979 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 TCEAL8Q8IYN2 117 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 TMEM130Q8N3G9 435 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 SLC44A3Q8N4M1 653 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 MAFFQ9ULX9 164 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 EXOC7Q9UPT5 735 aa24.62■■□□□ 1.53
TMEM260-214ENST00000556975 OAZ2O95190 189 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 ZSCAN22P10073 491 aaPredicted RBP24.61■■□□□ 1.53
TMEM260-214ENST00000556975 ADSSP30520 456 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 ELF1P32519 619 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 ACOT2P49753 483 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 NUBP1P53384 320 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 VCPP55072 806 aaKnown RBP24.61■■□□□ 1.53
TMEM260-214ENST00000556975 NTHL1P78549 312 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 L1TD1Q5T7N2 865 aaKnown RBP24.61■■□□□ 1.53
TMEM260-214ENST00000556975 BEST2Q8NFU1 509 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 RSAD2Q8WXG1 361 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 ACCSQ96QU6 501 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 OXCT2Q9BYC2 517 aaPredicted RBP24.61■■□□□ 1.53
TMEM260-214ENST00000556975 DNMT3BQ9UBC3 853 aaKnown RBP24.61■■□□□ 1.53
TMEM260-214ENST00000556975 CDH7Q9ULB5 785 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 KCNH3Q9ULD8 1083 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 POLIQ9UNA4 740 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 PCDHB13Q9Y5F0 798 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 NOTCH4Q99466 2003 aa24.61■■□□□ 1.53
TMEM260-214ENST00000556975 CUTAO60888 179 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 HSP90AA1P07900 732 aaKnown RBP24.6■■□□□ 1.53
TMEM260-214ENST00000556975 IDEP14735 1019 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 GUCY2FP51841 1108 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 KCNA1Q09470 495 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 ALCAMQ13740 583 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 E2F4Q16254 413 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 CRELD2Q6UXH1 353 aaPredicted RBP24.6■■□□□ 1.53
TMEM260-214ENST00000556975 PDILTQ8N807 584 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 FAM212AQ96EL1 285 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 LRRC27Q9C0I9 530 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 TNMDQ9H2S6 317 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 IKZF4Q9H2S9 585 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 CUEDC2Q9H467 287 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 AVENQ9NQS1 362 aaPredicted RBP24.6■■□□□ 1.53
TMEM260-214ENST00000556975 PANK4Q9NVE7 773 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 KBTBD4Q9NVX7 518 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 C2CD2Q9Y426 696 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 GTF3C3Q9Y5Q9 886 aa24.6■■□□□ 1.53
TMEM260-214ENST00000556975 PIRO00625 290 aa24.59■■□□□ 1.53
TMEM260-214ENST00000556975 F13A1P00488 732 aa24.59■■□□□ 1.53
TMEM260-214ENST00000556975 LILRA4P59901 499 aa24.59■■□□□ 1.53
TMEM260-214ENST00000556975 YWHAHQ04917 246 aaPredicted RBP24.59■■□□□ 1.53
TMEM260-214ENST00000556975 HTR4Q13639 388 aa24.59■■□□□ 1.53
TMEM260-214ENST00000556975 TMEM132DQ14C87 1099 aa24.59■■□□□ 1.53
TMEM260-214ENST00000556975 PRSS33Q8NF86 280 aa24.59■■□□□ 1.53
TMEM260-214ENST00000556975 POMGNT1Q8WZA1 660 aa24.59■■□□□ 1.53
TMEM260-214ENST00000556975 HCFC1R1Q9NWW0 138 aa24.59■■□□□ 1.53
TMEM260-214ENST00000556975 TBC1D7Q9P0N9 293 aa24.59■■□□□ 1.53
TMEM260-214ENST00000556975 AFF4Q9UHB7 1163 aaKnown RBP24.59■■□□□ 1.53
TMEM260-214ENST00000556975 ANK1P16157 1881 aa24.59■■□□□ 1.53
TMEM260-214ENST00000556975 ANO9A1A5B4 782 aa24.58■■□□□ 1.53
TMEM260-214ENST00000556975 GCNT3O95395 438 aa24.58■■□□□ 1.53
TMEM260-214ENST00000556975 SEC24AO95486 1093 aa24.58■■□□□ 1.53
TMEM260-214ENST00000556975 NFICP08651 508 aa24.58■■□□□ 1.53
TMEM260-214ENST00000556975 TYMPP19971 482 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms