RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 C1orf127Q8N9H9 656 aa25.53■■□□□ 1.68
SIX4-203ENST00000556952 TAF4BQ92750 862 aa25.53■■□□□ 1.68
SIX4-203ENST00000556952 PI4K2AQ9BTU6 479 aa25.53■■□□□ 1.68
SIX4-203ENST00000556952 A0A0U1RQF3 1178 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 XPOTO43592 962 aaKnown RBP25.52■■□□□ 1.68
SIX4-203ENST00000556952 ITGA4P13612 1032 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 NOP14P78316 857 aaKnown RBP25.52■■□□□ 1.68
SIX4-203ENST00000556952 ASIC2Q16515 512 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 SGSM1Q2NKQ1 1148 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 OTOP2Q7RTS6 562 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 KIAA1524Q8TCG1 905 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 ADAM2Q99965 735 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 RNF39Q9H2S5 420 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 SOWAHDA6NJG2 315 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 CST3P01034 146 aaPredicted RBP25.52■■□□□ 1.68
SIX4-203ENST00000556952 SERPING1P05155 500 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 PFKMP08237 780 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 FERP16591 822 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 TBXAS1P24557 533 aaPredicted RBP25.52■■□□□ 1.68
SIX4-203ENST00000556952 SOX5P35711 763 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 ZBTB6Q15916 424 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 JAKMIP2Q96AA8 810 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 GPR88Q9GZN0 384 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 UBQLN1Q9UMX0 589 aaKnown RBP25.52■■□□□ 1.68
SIX4-203ENST00000556952 GIT1Q9Y2X7 761 aa25.52■■□□□ 1.68
SIX4-203ENST00000556952 ESPNB1AK53 854 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 FGBP02675 491 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 CCDC172P0C7W6 258 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 ARHGAP44Q17R89 818 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 SMYD5Q6GMV2 418 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 CCDC170Q8IYT3 715 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 BEST2Q8NFU1 509 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 APBB2Q92870 758 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 TATDN2Q93075 761 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 PGBD4Q96DM1 585 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 FAXDC2Q96IV6 333 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 ZMAT2Q96NC0 199 aaKnown RBP25.51■■□□□ 1.67
SIX4-203ENST00000556952 CHP1Q99653 195 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 RGS18Q9NS28 235 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 DPP3Q9NY33 737 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 CXXC1Q9P0U4 656 aaPredicted RBP25.51■■□□□ 1.67
SIX4-203ENST00000556952 SIX4Q9UIU6 781 aa25.51■■□□□ 1.67
SIX4-203ENST00000556952 R3HCC1Q9Y3T6 440 aaKnown RBP25.51■■□□□ 1.67
SIX4-203ENST00000556952 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.51■■□□□ 1.67
SIX4-203ENST00000556952 BZW2Q9Y6E2 419 aaKnown RBP25.51■■□□□ 1.67
SIX4-203ENST00000556952 ITGB3P05106 788 aa25.5■■□□□ 1.67
SIX4-203ENST00000556952 ATICP31939 592 aa25.5■■□□□ 1.67
SIX4-203ENST00000556952 PRKCIP41743 596 aa25.5■■□□□ 1.67
SIX4-203ENST00000556952 MYL6P60660 151 aa25.5■■□□□ 1.67
SIX4-203ENST00000556952 ZNF699Q32M78 642 aa25.5■■□□□ 1.67
SIX4-203ENST00000556952 PLEKHG4Q58EX7 1191 aa25.5■■□□□ 1.67
SIX4-203ENST00000556952 HGSNATQ68CP4 663 aa25.5■■□□□ 1.67
SIX4-203ENST00000556952 CXorf38Q8TB03 319 aa25.5■■□□□ 1.67
SIX4-203ENST00000556952 KREMEN1Q96MU8 473 aa25.5■■□□□ 1.67
SIX4-203ENST00000556952 APOBEC3GQ9HC16 384 aaKnown RBP25.5■■□□□ 1.67
SIX4-203ENST00000556952 UBN1Q9NPG3 1134 aa25.5■■□□□ 1.67
SIX4-203ENST00000556952 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.5■■□□□ 1.67
SIX4-203ENST00000556952 GBF1Q92538 1859 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 SMIM28A0A1B0GU29 152 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 SSU72P8A0A1W2PR75 194 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 KRT19P08727 400 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 RAD9BQ6WBX8 426 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 DBF4BQ8NFT6 615 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 SHC3Q92529 594 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 RNPC3Q96LT9 517 aaKnown RBP25.49■■□□□ 1.67
SIX4-203ENST00000556952 XYLT2Q9H1B5 865 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 VRTNQ9H8Y1 702 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 KLK14Q9P0G3 267 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 ARHGAP20Q9P2F6 1191 aa25.49■■□□□ 1.67
SIX4-203ENST00000556952 A0A1W2PPC1 479 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 STAU1O95793 577 aaKnown RBP25.48■■□□□ 1.67
SIX4-203ENST00000556952 CYP3A5P20815 502 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 CYLC1P35663 651 aaPredicted RBP25.48■■□□□ 1.67
SIX4-203ENST00000556952 RBP5P82980 135 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 MAPK8IP2Q13387 824 aaPredicted RBP25.48■■□□□ 1.67
SIX4-203ENST00000556952 CUL2Q13617 745 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 TDRD12Q587J7 1177 aaKnown RBP25.48■■□□□ 1.67
SIX4-203ENST00000556952 RASIP1Q5U651 963 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 SPOPLQ6IQ16 392 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 CNKSR3Q6P9H4 555 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 IRF2BP2Q7Z5L9 587 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 HERVK_113Q902F9 699 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 KAT5Q92993 513 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 CXCL16Q9H2A7 254 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 NHEJ1Q9H9Q4 299 aaPredicted RBP25.48■■□□□ 1.67
SIX4-203ENST00000556952 NUB1Q9Y5A7 615 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 CLSTN1O94985 981 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 POLR2BP30876 1174 aaKnown RBP25.48■■□□□ 1.67
SIX4-203ENST00000556952 KLHL30Q0D2K2 578 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 GLRA4Q5JXX5 417 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 SLC24A5Q71RS6 500 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 ECHDC2Q86YB7 292 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 SEPT8Q92599 483 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 RPS6KC1Q96S38 1066 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 NIF3L1Q9GZT8 377 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 TSPYL2Q9H2G4 693 aaPredicted RBP25.48■■□□□ 1.67
SIX4-203ENST00000556952 KCND1Q9NSA2 647 aa25.48■■□□□ 1.67
SIX4-203ENST00000556952 TDRD15B5MCY1 1934 aaKnown RBP25.47■■□□□ 1.67
SIX4-203ENST00000556952 FOXN3O00409 490 aaPredicted RBP25.47■■□□□ 1.67
SIX4-203ENST00000556952 GFPT2O94808 682 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms