RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 ZNF699Q32M78 642 aa19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 JADE1Q6IE81 842 aa19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 WDR93Q6P2C0 686 aa19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 RUFY4Q6ZNE9 571 aa19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 USP38Q8NB14 1042 aa19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 ZNF564Q8TBZ8 553 aaPredicted RBP19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 PBKQ96KB5 322 aa19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 KRT12Q99456 494 aa19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 SELENOOQ9BVL4 669 aa19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 CNOT8Q9UFF9 292 aaKnown RBP19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 BRCA2P51587 3418 aa19.59■□□□□ 0.73
SDR39U1-220ENST00000556548 B4GALT4O60513 344 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 ERLIN1O75477 346 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 F2P00734 622 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 UNGP13051 313 aaPredicted RBP19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 BPIFB4P59827 614 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 ZNF200P98182 395 aaPredicted RBP19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 ITIH3Q06033 890 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 SGSM1Q2NKQ1 1148 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 CCDC70Q6NSX1 233 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 IFNLR1Q8IU57 520 aaPredicted RBP19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 KLHL7Q8IXQ5 586 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 PLCD3Q8N3E9 789 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 GDAP1L1Q96MZ0 367 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 POLIQ9UNA4 740 aa19.58■□□□□ 0.73
SDR39U1-220ENST00000556548 CCDC66A2RUB6 948 aa19.58■□□□□ 0.72
SDR39U1-220ENST00000556548 DDX3YO15523 660 aaKnown RBP19.58■□□□□ 0.72
SDR39U1-220ENST00000556548 MYBL2P10244 700 aa19.58■□□□□ 0.72
SDR39U1-220ENST00000556548 MCF2P10911 925 aa19.58■□□□□ 0.72
SDR39U1-220ENST00000556548 ZNF211Q13398 564 aaPredicted RBP19.58■□□□□ 0.72
SDR39U1-220ENST00000556548 MFSD10Q14728 455 aa19.58■□□□□ 0.72
SDR39U1-220ENST00000556548 C8orf74Q6P047 294 aa19.58■□□□□ 0.72
SDR39U1-220ENST00000556548 FUT8Q9BYC5 575 aa19.58■□□□□ 0.72
SDR39U1-220ENST00000556548 ARHGAP39Q9C0H5 1083 aa19.58■□□□□ 0.72
SDR39U1-220ENST00000556548 ZCCHC17Q9NP64 241 aaKnown RBP19.58■□□□□ 0.72
SDR39U1-220ENST00000556548 TARSL2A2RTX5 802 aaKnown RBP19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 CYP1A2P05177 515 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 RAP1GAPP47736 663 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 GUCY2FP51841 1108 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 DCAF12L1Q5VU92 463 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 OSMRQ99650 979 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 NIF3L1Q9GZT8 377 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 CISHQ9NSE2 258 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 NOC2LQ9Y3T9 749 aaKnown RBP19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 PASKQ96RG2 1323 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 RRN3P2A6NIE6 340 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 CYP2C9P11712 490 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 COMTP21964 271 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 SLC10A6Q3KNW5 377 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 ADAT2Q7Z6V5 191 aaKnown RBP19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 C1orf127Q8N9H9 656 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 HNRNPLLQ8WVV9 542 aaKnown RBP19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 KRT35Q92764 455 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 APBA2Q99767 749 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 XYLT2Q9H1B5 865 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 SIX4Q9UIU6 781 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 GTF3C4Q9UKN8 822 aa19.57■□□□□ 0.72
SDR39U1-220ENST00000556548 NRCAMQ92823 1304 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 IL18RAPO95256 599 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 ITGB3P05106 788 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 MARCKSL1P49006 195 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 INHBEP58166 350 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 AADACL2Q6P093 401 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 ZNF677Q86XU0 584 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 MCOLN2Q8IZK6 566 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 DNAJB3Q8WWF6 145 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 ALG3Q92685 438 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 TRIM7Q9C029 511 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 AP5M1Q9H0R1 490 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 ADAMTS10Q9H324 1103 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 TLL2Q9Y6L7 1015 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 ZNF236Q9UL36 1845 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 KAT6AQ92794 2004 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 PGRMC1O00264 195 aaKnown RBP19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 CES2O00748 559 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 RRM1P23921 792 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 NSFP46459 744 aaKnown RBP19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 ACTRT1Q8TDG2 376 aa19.56■□□□□ 0.72
SDR39U1-220ENST00000556548 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.56■□□□□ 0.721e-10■□□□□ 10
SDR39U1-220ENST00000556548 ZSCAN5CA6NGD5 496 aaPredicted RBP19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 TREHO43280 583 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 GPR32O75388 356 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 ITGA4P13612 1032 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 BRD2P25440 801 aaKnown RBP19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 PSEN2P49810 448 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 HADHBP55084 474 aaKnown RBP19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 CDH8P55286 799 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 ORC1Q13415 861 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 WDR72Q3MJ13 1102 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 ZNF606Q8WXB4 792 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 C11orf70Q9BRQ4 267 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 CXCL16Q9H2A7 254 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 RNF19AQ9NV58 838 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 L1RE1Q9UN81 338 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 CNTN6Q9UQ52 1028 aa19.55■□□□□ 0.72
SDR39U1-220ENST00000556548 A0A1B0GUA9 196 aa19.54■□□□□ 0.72
SDR39U1-220ENST00000556548 NPTXRO95502 500 aa19.54■□□□□ 0.72
SDR39U1-220ENST00000556548 FGGP02679 453 aa19.54■□□□□ 0.72
SDR39U1-220ENST00000556548 CYP1A1P04798 512 aaPredicted RBP19.54■□□□□ 0.72
SDR39U1-220ENST00000556548 TUBBP07437 444 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms