RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 CD207Q9UJ71 328 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 TPX2Q9ULW0 747 aaKnown RBP10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 PADI3Q9ULW8 664 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 KDM3AQ9Y4C1 1321 aa10.21□□□□□ -0.78
GTF2A1-204ENST00000556268 TECTAO75443 2155 aa10.21□□□□□ -0.78
GTF2A1-204ENST00000556268 IGKV6D-21A0A0A0MT36 114 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 STXBP3O00186 592 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 MARK3P27448 753 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 FAM189BP81408 668 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 MTMR1Q13613 665 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 PLCL1Q15111 1095 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 NKPD1Q17RQ9 610 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 SNAP47Q5SQN1 464 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 SMRP1Q8NCR6 262 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 CYP2W1Q8TAV3 490 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 ATP8B4Q8TF62 1192 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 TNPO1Q92973 898 aaKnown RBP10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 ACSF2Q96CM8 615 aaPredicted RBP10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 ZBTB10Q96DT7 871 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 MYL10Q9BUA6 226 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 CELF4Q9BZC1 486 aaKnown RBP10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 KCNH7Q9NS40 1196 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 MUTYHQ9UIF7 546 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 ADAM30Q9UKF2 790 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 PCDHA6Q9UN73 950 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 IGSF9BQ9UPX0 1349 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 PCDHA8Q9Y5H6 950 aa10.2□□□□□ -0.78
GTF2A1-204ENST00000556268 NFASCO94856 1347 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 SMIM35A0A1B0GVV1 85 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 MEIS1O00470 390 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 PLEKHA8P1O95397 391 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 MCM5P33992 734 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 PLCB4Q15147 1175 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 CLUL1Q15846 466 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 PKN1Q16512 942 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 TMEM184AQ6ZMB5 413 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 ADGRD2Q7Z7M1 963 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 KIAA0319LQ8IZA0 1049 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 FANCBQ8NB91 859 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 GOLM1Q8NBJ4 401 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 POF1BQ8WVV4 589 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 MXRA8Q9BRK3 442 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 SLC9A2Q9UBY0 812 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 SEC63Q9UGP8 760 aaKnown RBP10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 RALGAPA2Q2PPJ7 1873 aa10.19□□□□□ -0.78
GTF2A1-204ENST00000556268 SH2B2O14492 632 aaPredicted RBP10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 PRC1O43663 620 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 GLP2RO95838 553 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 STAG3L1P0CL83 205 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 CALM1P0DP23 149 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 CALM2P0DP24 149 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 CALM3P0DP25 149 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 ARP10275 920 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 GARTP22102 1010 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 SARSP49591 514 aaKnown RBP10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 SLC26A2P50443 739 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 STAT5BP51692 787 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 ACTR2P61160 394 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 IGBP1P78318 339 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 ZXDAP98168 799 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 UBE3AQ05086 875 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 KCNC3Q14003 757 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 UBE2SQ16763 222 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 SFRP5Q5T4F7 317 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 SLC6A19Q695T7 634 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 MTHFD1LQ6UB35 978 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 ABHD15Q6UXT9 468 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 MCATQ8IVS2 390 aaKnown RBP10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 SUSD6Q92537 303 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 PPP2R3CQ969Q6 453 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 FAM49AQ9H0Q0 323 aaPredicted RBP10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 AGO4Q9HCK5 861 aaKnown RBP10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 ERVK-5Q9HDB9 667 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 TRPV2Q9Y5S1 764 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 RBM8AQ9Y5S9 174 aaKnown RBP10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 SNX11Q9Y5W9 270 aa10.18□□□□□ -0.78
GTF2A1-204ENST00000556268 NLRC5Q86WI3 1866 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 DOCK5Q9H7D0 1870 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 FOSP01100 380 aaPredicted RBP10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 SCG2P13521 617 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 ATF7P17544 494 aaPredicted RBP10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 PLCG1P19174 1290 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 FUT4P22083 530 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 KLRC1P26715 233 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 NDUFV1P49821 464 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 GATMP50440 423 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 CLCN7P51798 805 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 TMEM62Q0P6H9 643 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 ITGB3BPQ13352 177 aaPredicted RBP10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 NECTIN1Q15223 517 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 CEP55Q53EZ4 464 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 CASC1Q6TDU7 716 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 C22orf34Q6ZV56 151 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 TMTC3Q6ZXV5 915 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 SLC24A5Q71RS6 500 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 SGMS1Q86VZ5 419 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 FBXO27Q8NI29 283 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 TRAPPC12Q8WVT3 735 aa10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 PHF7Q9BWX1 381 aaPredicted RBP10.17□□□□□ -0.78
GTF2A1-204ENST00000556268 LSG1Q9H089 658 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms