RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 TRIM49CP0CI26 452 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 POLR2BP30876 1174 aaKnown RBP15.27■□□□□ 0.04
SNX6-206ENST00000556162 MCCD1P59942 119 aaPredicted RBP15.27■□□□□ 0.04
SNX6-206ENST00000556162 ELAVL2Q12926 359 aaKnown RBP15.27■□□□□ 0.04
SNX6-206ENST00000556162 BIRC3Q13489 604 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 BMS1Q14692 1282 aaKnown RBP15.27■□□□□ 0.04
SNX6-206ENST00000556162 PTPROQ16827 1216 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 TCERG1LQ5VWI1 586 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 FUT10Q6P4F1 479 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 C3orf58Q8NDZ4 430 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 FUCA2Q9BTY2 467 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 LMAN2LQ9H0V9 348 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 THAP9Q9H5L6 903 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 SF3B1O75533 1304 aaKnown RBP eCLIP15.27■□□□□ 0.042e-6■■■■■ 67.6
SNX6-206ENST00000556162 MYO9BQ13459 2157 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 KIAA1671Q9BY89 1806 aa15.27■□□□□ 0.03
SNX6-206ENST00000556162 ANK1P16157 1881 aa15.27■□□□□ 0.03
SNX6-206ENST00000556162 PAX3P23760 479 aa15.27■□□□□ 0.03
SNX6-206ENST00000556162 IGFBP6P24592 240 aaPredicted RBP15.27■□□□□ 0.03
SNX6-206ENST00000556162 GTF2H1P32780 548 aa15.27■□□□□ 0.03
SNX6-206ENST00000556162 DCAF17Q5H9S7 520 aaPredicted RBP15.27■□□□□ 0.03
SNX6-206ENST00000556162 CD300LGQ6UXG3 332 aa15.27■□□□□ 0.03
SNX6-206ENST00000556162 FAM114A1Q8IWE2 563 aa15.27■□□□□ 0.03
SNX6-206ENST00000556162 VPS52Q8N1B4 723 aa15.27■□□□□ 0.03
SNX6-206ENST00000556162 MICAL1Q8TDZ2 1067 aa15.27■□□□□ 0.03
SNX6-206ENST00000556162 GPR62Q9BZJ7 368 aa15.27■□□□□ 0.03
SNX6-206ENST00000556162 NFE2L3Q9Y4A8 694 aa15.27■□□□□ 0.03
SNX6-206ENST00000556162 PPEF2O14830 753 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 TRANK1O15050 2925 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 LPXNO60711 386 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 C4BPAP04003 597 aaKnown RBP15.26■□□□□ 0.03
SNX6-206ENST00000556162 SOD2P04179 222 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 DNAJB1P25685 340 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 PNPLA4P41247 253 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 GCLMP48507 274 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 TAF6P49848 677 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 MARSP56192 900 aaKnown RBP15.26■□□□□ 0.03
SNX6-206ENST00000556162 LILRA4P59901 499 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 TRPC3Q13507 836 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 PDCD11Q14690 1871 aaKnown RBP15.26■□□□□ 0.03
SNX6-206ENST00000556162 C1orf220Q5T0J3 134 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 SV2AQ7L0J3 742 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 TMC7Q7Z402 723 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 LRRC52Q8N7C0 313 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 ZNF560Q96MR9 790 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 GAS2L1Q99501 681 aaPredicted RBP15.26■□□□□ 0.03
SNX6-206ENST00000556162 MMRN2Q9H8L6 949 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 TLR9Q9NR96 1032 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 MAGEC2Q9UBF1 373 aaPredicted RBP15.26■□□□□ 0.03
SNX6-206ENST00000556162 SIX4Q9UIU6 781 aa15.26■□□□□ 0.03
SNX6-206ENST00000556162 CST3P01034 146 aaPredicted RBP15.25■□□□□ 0.03
SNX6-206ENST00000556162 BRCC3P46736 316 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 ZNF165P49910 485 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 MYL5Q02045 173 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 PPP3CAQ08209 521 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 MYO1EQ12965 1108 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 USP41Q3LFD5 358 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 ZACNQ401N2 412 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 FAM171A1Q5VUB5 890 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 TDRD10Q5VZ19 366 aaKnown RBP15.25■□□□□ 0.03
SNX6-206ENST00000556162 KIAA1841Q6NSI8 718 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 DSTYKQ6XUX3 929 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 CXorf38Q8TB03 319 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 CNOT6LQ96LI5 555 aaKnown RBP15.25■□□□□ 0.03
SNX6-206ENST00000556162 BPIFA3Q9BQP9 254 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 VN1R3Q9BXE9 311 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 TMEM8AQ9HCN3 771 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 NGRNQ9NPE2 291 aaKnown RBP15.25■□□□□ 0.03
SNX6-206ENST00000556162 LMCD1Q9NZU5 365 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 I3L4J1 428 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 CSPG5O95196 566 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 EFEMP2O95967 443 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 IGFBP4P22692 258 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 ERVFC1P60507 584 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 CAMK1Q14012 370 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 SV2CQ496J9 727 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 TIGD5Q53EQ6 642 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 KRT39Q6A163 491 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 PDE12Q6L8Q7 609 aaKnown RBP15.25■□□□□ 0.03
SNX6-206ENST00000556162 TAS1R1Q7RTX1 841 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 CEP57Q86XR8 500 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 IRF2BP1Q8IU81 584 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 TRIM59Q8IWR1 403 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 SLC35C1Q96A29 364 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 MRPL38Q96DV4 380 aaKnown RBP15.25■□□□□ 0.03
SNX6-206ENST00000556162 SUSD3Q96L08 255 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 CDX2Q99626 313 aaPredicted RBP15.25■□□□□ 0.03
SNX6-206ENST00000556162 TCF25Q9BQ70 676 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 ENTPD7Q9NQZ7 604 aa15.25■□□□□ 0.03
SNX6-206ENST00000556162 SAMSN1Q9NSI8 373 aaKnown RBP15.25■□□□□ 0.03
SNX6-206ENST00000556162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.25■□□□□ 0.03
SNX6-206ENST00000556162 SMTNL1A8MU46 457 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 KPNA7A9QM74 516 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 CXCL14O95715 111 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 CAVIN2O95810 425 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 CTSAP10619 480 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 MTIF2P46199 727 aaKnown RBP15.24■□□□□ 0.03
SNX6-206ENST00000556162 NCOA4Q13772 614 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 SCARA3Q6AZY7 606 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms