RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 FAM81BQ96LP2 452 aa11.88□□□□□ -0.51
TMEM260-208ENST00000555905 PPP1R9BQ96SB3 815 aa11.88□□□□□ -0.51
TMEM260-208ENST00000555905 EDEM3Q9BZQ6 932 aa11.88□□□□□ -0.51
TMEM260-208ENST00000555905 RNF19AQ9NV58 838 aa11.88□□□□□ -0.51
TMEM260-208ENST00000555905 CEP72Q9P209 647 aa11.88□□□□□ -0.51
TMEM260-208ENST00000555905 APEX2Q9UBZ4 518 aa11.88□□□□□ -0.51
TMEM260-208ENST00000555905 TUBGCP4Q9UGJ1 667 aa11.88□□□□□ -0.51
TMEM260-208ENST00000555905 ZMYND8Q9ULU4 1186 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-208ENST00000555905 AGAP1Q9UPQ3 857 aa11.88□□□□□ -0.51
TMEM260-208ENST00000555905 NR2E3Q9Y5X4 410 aa11.88□□□□□ -0.51
TMEM260-208ENST00000555905 A0A1W2PQJ5 194 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 UPP2O95045 317 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 POLR2BP30876 1174 aaKnown RBP11.87□□□□□ -0.51
TMEM260-208ENST00000555905 GUCY2FP51841 1108 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 GSDMDP57764 484 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 MYL6P60660 151 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 POLR2FP61218 127 aaKnown RBP11.87□□□□□ -0.51
TMEM260-208ENST00000555905 RNASELQ05823 741 aaKnown RBP11.87□□□□□ -0.51
TMEM260-208ENST00000555905 LRMPQ12912 555 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 TBX2Q13207 712 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-208ENST00000555905 ZNF699Q32M78 642 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 CLLU1OSQ5K130 101 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.87□□□□□ -0.51
TMEM260-208ENST00000555905 GSTCDQ8NEC7 633 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 FAM193BQ96PV7 902 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-208ENST00000555905 PI4K2AQ9BTU6 479 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 MRPL9Q9BYD2 267 aaKnown RBP11.87□□□□□ -0.51
TMEM260-208ENST00000555905 SIX2Q9NPC8 291 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.87□□□□□ -0.51
TMEM260-208ENST00000555905 SIX4Q9UIU6 781 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 FBXL5Q9UKA1 691 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 CAPN11Q9UMQ6 739 aa11.87□□□□□ -0.51
TMEM260-208ENST00000555905 COLQQ9Y215 455 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-208ENST00000555905 LUC7L2Q9Y383 392 aaKnown RBP11.87□□□□□ -0.51
TMEM260-208ENST00000555905 ZBBXA8MT70 800 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 AKR1B15C9JRZ8 316 aaPredicted RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 NOL4O94818 638 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 ASS1P00966 412 aaKnown RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 CST3P01034 146 aaPredicted RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 GYPCP04921 128 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 P4HA1P13674 534 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 UCHL3P15374 230 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 CASP14P31944 242 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 RPL9P32969 192 aaKnown RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 PNPLA4P41247 253 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 AFF1P51825 1210 aaKnown RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 MFAP3P55082 362 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 WDR5P61964 334 aaKnown RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 NOP14P78316 857 aaKnown RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 APBA1Q02410 837 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 TUSC3Q13454 348 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 TSR1Q2NL82 804 aaKnown RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 C9orf57Q5W0N0 161 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 PHLDB3Q6NSJ2 640 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 ZNF365Q70YC5 407 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 ENOSF1Q7L5Y1 443 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 OTOP2Q7RTS6 562 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 CNGA4Q8IV77 575 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 CRIPAKQ8N1N5 446 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 PPM1KQ8N3J5 372 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 LRRC52Q8N7C0 313 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 DDX27Q96GQ7 796 aaKnown RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 HPDLQ96IR7 371 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 ZNF560Q96MR9 790 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 UROC1Q96N76 676 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 NUCKS1Q9H1E3 243 aaKnown RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 GANQ9H2C0 597 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 MTIF3Q9H2K0 278 aaKnown RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 UBE2TQ9NPD8 197 aaPredicted RBP11.86□□□□□ -0.51
TMEM260-208ENST00000555905 MIOSQ9NXC5 875 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 DNAJC12Q9UKB3 198 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 PLAGL2Q9UPG8 496 aa11.86□□□□□ -0.51
TMEM260-208ENST00000555905 ANO9A1A5B4 782 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 TBKBP1A7MCY6 615 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 PIRO00625 290 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 EPHB6O15197 1021 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 STAU1O95793 577 aaKnown RBP11.85□□□□□ -0.51
TMEM260-208ENST00000555905 TBXAS1P24557 533 aaPredicted RBP11.85□□□□□ -0.51
TMEM260-208ENST00000555905 LRPAP1P30533 357 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 KRT9P35527 623 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 ZBED6P86452 979 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 GCNT1Q02742 428 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 SOX4Q06945 474 aaPredicted RBP11.85□□□□□ -0.51
TMEM260-208ENST00000555905 RAPGEF1Q13905 1077 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 NAB2Q15742 525 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 SV2CQ496J9 727 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 ZNF667Q5HYK9 610 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 IQCEQ6IPM2 695 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 SPOPLQ6IQ16 392 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 DPY19L2P1Q6NXN4 242 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 GJB7Q6PEY0 223 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 C16orf59Q7L2K0 433 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 RRAGAQ7L523 313 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 CCDC186Q7Z3E2 898 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 FMNL3Q8IVF7 1028 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 ARHGEF19Q8IW93 802 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 CXorf38Q8TB03 319 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 TATDN2Q93075 761 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 TOP1MTQ969P6 601 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 FAXDC2Q96IV6 333 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms