RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 BSNDQ8WZ55 320 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 MAGEB18Q96M61 343 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 FNBP1Q96RU3 617 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 ATP6V0A4Q9HBG4 840 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 UBN1Q9NPG3 1134 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 NINJ2Q9NZG7 142 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 ARL2BPQ9Y2Y0 163 aa17.2■□□□□ 0.34
TUBB3-209ENST00000555609 C21orf2O43822 256 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 GJB6O95452 261 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 PIGRP01833 764 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 EZRP15311 586 aaKnown RBP17.19■□□□□ 0.34
TUBB3-209ENST00000555609 SLC18A1P54219 525 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 PPARDQ03181 441 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 UBAP2Q5T6F2 1119 aaKnown RBP17.19■□□□□ 0.34
TUBB3-209ENST00000555609 PLEKHA7Q6IQ23 1121 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 ABRAQ8N0Z2 381 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 FAM212AQ96EL1 285 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 BICD1Q96G01 975 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 TTC25Q96NG3 672 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 FAM213AQ9BRX8 229 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 CD248Q9HCU0 757 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 NKIRAS1Q9NYS0 192 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.19■□□□□ 0.34
TUBB3-209ENST00000555609 GABBR1Q9UBS5 961 aa17.19■□□□□ 0.34
TUBB3-209ENST00000555609 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-209ENST00000555609 HLA-DRAP01903 254 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 IFNAR2P48551 515 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 OAZ1P54368 228 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 STRN3Q13033 797 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 TDRPQ86YL5 185 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 RCOR2Q8IZ40 523 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 SH2D3AQ9BRG2 576 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 KIFC3Q9BVG8 833 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 OSBPL8Q9BZF1 889 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.18■□□□□ 0.34
TUBB3-209ENST00000555609 UMODL1Q5DID0 1318 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 FAM170AA1A519 330 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 TCP11X1B4DZS4 312 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 RALAP11233 206 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 BRAFP15056 766 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 ACO1P21399 889 aaKnown RBP17.18■□□□□ 0.34
TUBB3-209ENST00000555609 LIG4P49917 911 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 COPS2P61201 443 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 MCL1Q07820 350 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 ACVR2BQ13705 512 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 KYNUQ16719 465 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 LRRC38Q5VT99 294 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 HIBCHQ6NVY1 386 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-209ENST00000555609 ZCCHC9Q8N567 271 aaKnown RBP17.18■□□□□ 0.34
TUBB3-209ENST00000555609 CPA5Q8WXQ8 436 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 ZNF516Q92618 1163 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 RBM41Q96IZ5 413 aaKnown RBP17.18■□□□□ 0.34
TUBB3-209ENST00000555609 CFAP57Q96MR6 1250 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 CYP26B1Q9NR63 512 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 ADAM22Q9P0K1 906 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 IP6K2Q9UHH9 426 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 ZNRF3Q9ULT6 936 aa17.18■□□□□ 0.34
TUBB3-209ENST00000555609 ZNF862O60290 1169 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 ATP2C2O75185 946 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 NR3C2P08235 984 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 KCNA2P16389 499 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 SKIV2L2P42285 1042 aaKnown RBP17.17■□□□□ 0.34
TUBB3-209ENST00000555609 PIK3CAP42336 1068 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 NOMO3P69849 1222 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 CCDC15Q0P6D6 951 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 MAMLD1Q13495 774 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 CUL2Q13617 745 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 TNFAIP1Q13829 316 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 ZNF268Q14587 947 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-209ENST00000555609 CCDC38Q502W7 563 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 XKR3Q5GH77 459 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 RNF43Q68DV7 783 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 SPATA21Q7Z572 469 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 TTLL6Q8N841 843 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 KCNK9Q9NPC2 374 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 PARVAQ9NVD7 372 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 SENP1Q9P0U3 644 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 PRKAG3Q9UGI9 489 aa17.17■□□□□ 0.34
TUBB3-209ENST00000555609 DRG1Q9Y295 367 aaKnown RBP17.17■□□□□ 0.34
TUBB3-209ENST00000555609 ATP6V1G2O95670 118 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 KLRC2P26717 231 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 PTPN7P35236 360 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 AP3M2P53677 418 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 BNIP1Q12981 228 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 RASA2Q15283 850 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 IZUMO3Q5VZ72 239 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 TAS1R3Q7RTX0 852 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 ANKS1BQ7Z6G8 1248 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 FAM228AQ86W67 206 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 CDAN1Q8IWY9 1227 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 FEZF2Q8TBJ5 459 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 NSUN6Q8TEA1 469 aaKnown RBP17.16■□□□□ 0.34
TUBB3-209ENST00000555609 ATG4AQ8WYN0 398 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 PI4K2AQ9BTU6 479 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 FHDC1Q9C0D6 1143 aaPredicted RBP17.16■□□□□ 0.34
TUBB3-209ENST00000555609 XPNPEP1Q9NQW7 623 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 HOMER2Q9NSB8 354 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 EURLQ9NYK6 297 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 MCM8Q9UJA3 840 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 NAALADL1Q9UQQ1 740 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms