RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	CD248	Q9HCU0	757 aa		5.37	□□□□□ -1.55
KTN1-222	ENST00000555506	GNL3L	Q9NVN8	582 aa	Known RBP	5.37	□□□□□ -1.55
KTN1-222	ENST00000555506	OGDHL	Q9ULD0	1010 aa		5.37	□□□□□ -1.55
KTN1-222	ENST00000555506	RUVBL1	Q9Y265	456 aa	Known RBP	5.37	□□□□□ -1.55
KTN1-222	ENST00000555506	ZMYM3	Q14202	1370 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	PATE3	B3GLJ2	98 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	MATN2	O00339	956 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	TBX3	O15119	743 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	CD1A	P06126	327 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	BRAF	P15056	766 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	TNFSF4	P23510	183 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	TRAPPC10	P48553	1259 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	GZMK	P49863	264 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	FMO1	Q01740	532 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	CREM	Q03060	361 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	ZNF543	Q08ER8	600 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	ZNF568	Q3ZCX4	644 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	C4orf46	Q504U0	113 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	FAM47A	Q5JRC9	791 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	DACT2	Q5SW24	774 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	EMC10	Q5UCC4	262 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	OTUD7B	Q6GQQ9	843 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	CELF5	Q8N6W0	485 aa	Known RBP	5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	CHST13	Q8NET6	341 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	RABGGTA	Q92696	567 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	CEP95	Q96GE4	821 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	SUCLG2	Q96I99	432 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	ZC3H10	Q96K80	434 aa	Known RBP	5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	WWC2-AS2	Q96NR7	200 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	GPHA2	Q96T91	129 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	PPCS	Q9HAB8	311 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	PNPLA8	Q9NP80	782 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	STARD7	Q9NQZ5	370 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	NCDN	Q9UBB6	729 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	PADI4	Q9UM07	663 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	NR2E1	Q9Y466	385 aa		5.36	□□□□□ -1.55
KTN1-222	ENST00000555506	KLRG2	A4D1S0	409 aa	Predicted RBP	5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	PMS2P1	A4D2B8	440 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	EN2	P19622	333 aa	Predicted RBP	5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	PIK3CG	P48736	1102 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	RAC3	P60763	192 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	APBA1	Q02410	837 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	PABPC1L	Q4VXU2	614 aa	Known RBP	5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	DGKK	Q5KSL6	1271 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	MFSD14B	Q5SR56	506 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	TCTN3	Q6NUS6	607 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	TAX1BP1	Q86VP1	789 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	SLC16A11	Q8NCK7	471 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	IL17RD	Q8NFM7	739 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	KBTBD7	Q8WVZ9	684 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	CFHR4	Q92496	578 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	MSLNL	Q96KJ4	702 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	DPYSL5	Q9BPU6	564 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	C1orf43	Q9BWL3	253 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	C1QTNF3	Q9BXJ4	246 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	ARFGAP3	Q9NP61	516 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	IL23A	Q9NPF7	189 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	TRMT13	Q9NUP7	481 aa	Known RBP	5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	CPNE7	Q9UBL6	633 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	SLC23A1	Q9UHI7	598 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	ZDHHC8	Q9ULC8	765 aa		5.35	□□□□□ -1.55
KTN1-222	ENST00000555506	POM121B	A6NF01	834 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506		F5H423	210 aa	Predicted RBP	5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	GRM6	O15303	877 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	SLC26A4	O43511	780 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	FOXS1	O43638	330 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	AHSG	P02765	367 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	RAP2A	P10114	183 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	TSHR	P16473	764 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	ZNF20	P17024	532 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	STT3A	P46977	705 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	ARFIP2	P53365	341 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	NPEPPS	P55786	919 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	SUMO3	P55854	103 aa	Predicted RBP	5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	SOX8	P57073	446 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	PTH1R	Q03431	593 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	FAM209B	Q5JX69	171 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	IZUMO3	Q5VZ72	239 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	SEM1	Q6ZVN7	128 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	ADGRE4P	Q86SQ3	457 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	SESTD1	Q86VW0	696 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	MYLK4	Q86YV6	388 aa	Predicted RBP	5.34	□□□□□ -1.55
KTN1-222	ENST00000555506		Q8TCH9	128 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	TNPO1	Q92973	898 aa	Known RBP	5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	KCNH6	Q9H252	994 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	CERS4	Q9HA82	394 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	GPRC5B	Q9NZH0	403 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	AFF4	Q9UHB7	1163 aa	Known RBP	5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	OAZ3	Q9UMX2	235 aa		5.34	□□□□□ -1.55
KTN1-222	ENST00000555506	NCK2	O43639	380 aa		5.33	□□□□□ -1.56
KTN1-222	ENST00000555506	IL18RAP	O95256	599 aa		5.33	□□□□□ -1.56
KTN1-222	ENST00000555506	MATN4	O95460	622 aa		5.33	□□□□□ -1.56
KTN1-222	ENST00000555506	FSHB	P01225	129 aa		5.33	□□□□□ -1.56
KTN1-222	ENST00000555506	GNAI3	P08754	354 aa		5.33	□□□□□ -1.56
KTN1-222	ENST00000555506	MTHFD1	P11586	935 aa	Known RBP	5.33	□□□□□ -1.56
KTN1-222	ENST00000555506	ATP5J	P18859	108 aa		5.33	□□□□□ -1.56
KTN1-222	ENST00000555506	GNAI1	P63096	354 aa		5.33	□□□□□ -1.56
KTN1-222	ENST00000555506	MRPL49	Q13405	166 aa	Known RBP	5.33	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms