RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 KCTD10Q9H3F6 313 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 CPSF3Q9UKF6 684 aaKnown RBP10.67□□□□□ -0.7
PSEN1-213ENST00000555386 PCDHB8Q9UN66 801 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 CTNND2Q9UQB3 1225 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 FAN1Q9Y2M0 1017 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.67□□□□□ -0.7
PSEN1-213ENST00000555386 STYXL1Q9Y6J8 313 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 SCN1AP35498 2009 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 TRIM49BA6NDI0 452 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 NRP1O14786 923 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 GRM6O15303 877 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 FGF18O76093 207 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 NR3C1P04150 777 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 ITGB1P05556 798 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 GALTP07902 379 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 NFICP08651 508 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 LINC00271P0C7V0 271 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 FECHP22830 423 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 WNT7BP56706 349 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 KYAT1Q16773 422 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 TMEM173Q86WV6 379 aaPredicted RBP10.66□□□□□ -0.7
PSEN1-213ENST00000555386 CNGA4Q8IV77 575 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 COLGALT2Q8IYK4 626 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 XXYLT1Q8NBI6 393 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 PPM1EQ8WY54 764 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 TSC1Q92574 1164 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 CCDC127Q96BQ5 260 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 TMEM169Q96HH4 297 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 PDE11AQ9HCR9 933 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 SPG21Q9NZD8 308 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 TUBGCP4Q9UGJ1 667 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 PPP2R2CQ9Y2T4 447 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 RWDD3Q9Y3V2 267 aa10.66□□□□□ -0.7
PSEN1-213ENST00000555386 TTC26A0AVF1 554 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 ZNF233A6NK53 670 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 PSMA7O14818 248 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 LDHAP00338 332 aaKnown RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 ADRB2P07550 413 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 DLATP10515 647 aaKnown RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 NR2F2P24468 414 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 IGFBP6P24592 240 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 CASP4P49662 377 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 PMS1P54277 932 aaKnown RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 TFAMQ00059 246 aaKnown RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 SOX4Q06945 474 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 TUSC3Q13454 348 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 TMEM132DQ14C87 1099 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 SNRNP35Q16560 246 aaKnown RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 COBLL1Q53SF7 1204 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 TRIM65Q6PJ69 517 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 ALKAL1Q6UXT8 129 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 SYT10Q6XYQ8 523 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 ADSSL1Q8N142 457 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 GOLGA5Q8TBA6 731 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 MICAL1Q8TDZ2 1067 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 BCL7CQ8WUZ0 217 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 NELFBQ8WX92 580 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 SAMD11Q96NU1 681 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 PPP1R10Q96QC0 940 aaKnown RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 GAS2L1Q99501 681 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 POP1Q99575 1024 aaKnown RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 CDX2Q99626 313 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 TSG101Q99816 390 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 C11orf84Q9BUA3 381 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-213ENST00000555386 CNTN3Q9P232 1028 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 PCDHGC5Q9Y5F6 944 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 ATG2AQ2TAZ0 1938 aa10.65□□□□□ -0.7
PSEN1-213ENST00000555386 I3L4J1 428 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 PDXKO00764 312 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 C2CD2LO14523 706 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 TADA2AO75478 443 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 CLSTN1O94985 981 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 KCNE1P15382 129 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 DNAJB1P25685 340 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 EEF1GP26641 437 aaKnown RBP10.64□□□□□ -0.71
PSEN1-213ENST00000555386 CLCNKBP51801 687 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 KRT17Q04695 432 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 DSC1Q08554 894 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 ADAM9Q13443 819 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 ADGRE1Q14246 886 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 CCDC85BQ15834 202 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-213ENST00000555386 HSP90AA4PQ58FG1 418 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 TCP11X2Q5H9J9 407 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 ANKRD40Q6AI12 368 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 CREBRFQ8IUR6 639 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 BRSK2Q8IWQ3 736 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 SLC39A11Q8N1S5 342 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 POF1BQ8WVV4 589 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 AUTS2Q8WXX7 1259 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 P2RX5Q93086 422 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 DHTKD1Q96HY7 919 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-213ENST00000555386 B3GALT6Q96L58 329 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 GUCD1Q96NT3 240 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 COLEC11Q9BWP8 271 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 THAP9Q9H5L6 903 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 MMRN2Q9H8L6 949 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 PLEKHA5Q9HAU0 1116 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 SLC38A7Q9NVC3 462 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 MTMR10Q9NXD2 777 aa10.64□□□□□ -0.71
PSEN1-213ENST00000555386 FRMD4BQ9Y2L6 1034 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms