RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 P4HA2O15460 535 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 TADA2AO75478 443 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 FGF18O76093 207 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 STAU1O95793 577 aaKnown RBP13.68□□□□□ -0.22
SYNE2-219ENST00000555323 ITGB3P05106 788 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 TRIM49P0CI25 452 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 TRIM49CP0CI26 452 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 IGFBP6P24592 240 aaPredicted RBP13.68□□□□□ -0.22
SYNE2-219ENST00000555323 PBX3P40426 434 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 PNPLA4P41247 253 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 GCLMP48507 274 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 LILRA4P59901 499 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 UBE3AQ05086 875 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 KCNH2Q12809 1159 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 KCNJ12Q14500 433 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 SCARA3Q6AZY7 606 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 SPRED2Q7Z698 418 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 DDX53Q86TM3 631 aaKnown RBP13.68□□□□□ -0.22
SYNE2-219ENST00000555323 TMEM130Q8N3G9 435 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 KLHL23Q8NBE8 558 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 SPPL3Q8TCT6 385 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 TUBGCP2Q9BSJ2 902 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 ZNF576Q9H609 170 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 MAGEC2Q9UBF1 373 aaPredicted RBP13.68□□□□□ -0.22
SYNE2-219ENST00000555323 ADAM28Q9UKQ2 775 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 PRG3Q9Y2Y8 225 aaPredicted RBP13.68□□□□□ -0.22
SYNE2-219ENST00000555323 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYNE2-219ENST00000555323 TDRD15B5MCY1 1934 aaKnown RBP13.68□□□□□ -0.22
SYNE2-219ENST00000555323 PDCD11Q14690 1871 aaKnown RBP13.67□□□□□ -0.22
SYNE2-219ENST00000555323 PPEF2O14830 753 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 KIF4AO95239 1232 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 VNN1O95497 513 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 ITGB1P05556 798 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 POLR2BP30876 1174 aaKnown RBP13.67□□□□□ -0.22
SYNE2-219ENST00000555323 ATICP31939 592 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 CTNNB1P35222 781 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 FMO5P49326 533 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 KRT17Q04695 432 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 MAN2A1Q16706 1144 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 CBWD6Q4V339 395 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 DCAF17Q5H9S7 520 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-219ENST00000555323 CBWD3Q5JTY5 395 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 CBWD5Q5RIA9 395 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 TCERG1LQ5VWI1 586 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 LUZP1Q86V48 1076 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 GPR65Q8IYL9 337 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-219ENST00000555323 RABGGTAQ92696 567 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 FAM84AQ96KN4 292 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 C11orf84Q9BUA3 381 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-219ENST00000555323 XYLT2Q9H1B5 865 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 CHST7Q9NS84 486 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 GDAP2Q9NXN4 497 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 LIMA1Q9UHB6 759 aaKnown RBP13.67□□□□□ -0.22
SYNE2-219ENST00000555323 AGAP1Q9UPQ3 857 aa13.67□□□□□ -0.22
SYNE2-219ENST00000555323 GBF1Q92538 1859 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 KPNA7A9QM74 516 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 F8W810 466 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 M0QZQ0 153 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 SPTLC1O15269 473 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 TRAPPC3O43617 180 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 N4BP1O75113 896 aaKnown RBP13.66□□□□□ -0.22
SYNE2-219ENST00000555323 AFPP02771 609 aaKnown RBP13.66□□□□□ -0.22
SYNE2-219ENST00000555323 FAM163BP0C2L3 166 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 MTIF2P46199 727 aaKnown RBP13.66□□□□□ -0.22
SYNE2-219ENST00000555323 TAF6P49848 677 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 MXI1P50539 228 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 ELAVL2Q12926 359 aaKnown RBP13.66□□□□□ -0.22
SYNE2-219ENST00000555323 NCOA4Q13772 614 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 SGSM1Q2NKQ1 1148 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 VWA3BQ502W6 1294 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 TIGD5Q53EQ6 642 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 MIIPQ5JXC2 388 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 FUT10Q6P4F1 479 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 APTXQ7Z2E3 356 aaKnown RBP13.66□□□□□ -0.22
SYNE2-219ENST00000555323 CREBRFQ8IUR6 639 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 FBXL13Q8NEE6 735 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 FBXO22Q8NEZ5 403 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 TAS1R2Q8TE23 839 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 TAF4BQ92750 862 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 FAXDC2Q96IV6 333 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 SUSD3Q96L08 255 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 VN1R3Q9BXE9 311 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 GPR62Q9BZJ7 368 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 TTYH1Q9H313 450 aaPredicted RBP13.66□□□□□ -0.22
SYNE2-219ENST00000555323 RAB20Q9NX57 234 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 PUF60Q9UHX1 559 aaKnown RBP13.66□□□□□ -0.22
SYNE2-219ENST00000555323 NUB1Q9Y5A7 615 aa13.66□□□□□ -0.22
SYNE2-219ENST00000555323 SF3B1O75533 1304 aaKnown RBP eCLIP13.65□□□□□ -0.22
SYNE2-219ENST00000555323 TRIOBPQ9H2D6 2365 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 GTPBP10A4D1E9 387 aaKnown RBP13.65□□□□□ -0.22
SYNE2-219ENST00000555323 TULP1O00294 542 aaPredicted RBP13.65□□□□□ -0.22
SYNE2-219ENST00000555323 SYN3O14994 580 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 LPXNO60711 386 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 PHACTR2O75167 634 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 ASS1P00966 412 aaKnown RBP13.65□□□□□ -0.22
SYNE2-219ENST00000555323 HLA-DRAP01903 254 aa13.65□□□□□ -0.22
SYNE2-219ENST00000555323 SOD2P04179 222 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms