RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TOGARAM2Q6ZUX3 1019 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 POLNQ7Z5Q5 900 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 CIR1Q86X95 450 aaPredicted RBP6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 SPICE1Q8N0Z3 855 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 D2HGDHQ8N465 521 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 MDGA1Q8NFP4 955 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 OR6B3Q8NGW1 331 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 CCDC138Q96M89 665 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 TRIM54Q9BYV2 358 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 UNKQ9C0B0 810 aaKnown RBP6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZCCHC4Q9H5U6 513 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 MYH16Q9H6N6 1097 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 SPON1Q9HCB6 807 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 PPP4R1LQ9P1A2 415 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZFR2Q9UPR6 939 aaKnown RBP6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 MED16Q9Y2X0 877 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 SH3BP1Q9Y3L3 701 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 RIPOR2Q9Y4F9 1068 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 PNPLA7Q6ZV29 1317 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 RASA4BC9J798 803 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 TBX3O15119 743 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 RASA4O43374 803 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 PRIM2P49643 509 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 ARFIP2P53365 341 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 SUMO3P55854 103 aaPredicted RBP6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 NOMO3P69849 1222 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 FMO1Q01740 532 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 BTKQ06187 659 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 KRTAP19-4Q3LI73 84 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 DCAF17Q5H9S7 520 aaPredicted RBP6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 TCTN3Q6NUS6 607 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 GLB1LQ6UWU2 654 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZNF783Q6ZMS7 281 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 ANKRD35Q8N283 1001 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 FITM2Q8N6M3 262 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 CELF5Q8N6W0 485 aaKnown RBP6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 OR52N2Q8NGI0 321 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 DDX17Q92841 729 aaKnown RBP6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 MIEF2Q96C03 454 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZC3H10Q96K80 434 aaKnown RBP6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 POLR3GLQ9BT43 218 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 GSTO2Q9H4Y5 243 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 PNPLA8Q9NP80 782 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 FBXO34Q9NWN3 711 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 POGKQ9P215 609 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 AFF4Q9UHB7 1163 aaKnown RBP6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 CORO2BQ9UQ03 480 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 USP19O94966 1318 aa6.66□□□□□ -1.34
CKS1BP1-201ENST00000555221 THP07101 528 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 HDCP19113 662 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 SLC6A4P31645 630 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 CASP5P51878 434 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 MXRA7P84157 204 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 FOXL1Q12952 345 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 SLC44A4Q53GD3 710 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 ELOA2Q8IYF1 753 aaPredicted RBP6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 FUKQ8N0W3 1084 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 RNF169Q8NCN4 708 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 SCAMP4Q969E2 229 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 MSLNLQ96KJ4 702 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 DPH1Q9BZG8 443 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 SIK2Q9H0K1 926 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 GPR35Q9HC97 309 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 TAGLN3Q9UI15 199 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 PADI4Q9UM07 663 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 DMTF1Q9Y222 760 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 DAAM1Q9Y4D1 1078 aa6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.65□□□□□ -1.34
CKS1BP1-201ENST00000555221 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 OTOL1A6NHN0 477 aaPredicted RBP6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 KPNA5O15131 536 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 CHEK2O96017 543 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 PHKA1P46020 1223 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 ZNF543Q08ER8 600 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 UTP14CQ5TAP6 766 aaKnown RBP6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 SMC5Q8IY18 1101 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 GSPT2Q8IYD1 628 aaKnown RBP6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 MB21D1Q8N884 522 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 OR10H5Q8NGA6 315 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 DEPTORQ8TB45 409 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 NMD3Q96D46 503 aaKnown RBP6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 P2RX7Q99572 595 aaKnown RBP6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 CPEB1Q9BZB8 566 aaKnown RBP6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 REXO4Q9GZR2 422 aaKnown RBP6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 XYLT2Q9H1B5 865 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 STARD7Q9NQZ5 370 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 CPNE7Q9UBL6 633 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 SRRDQ9UH36 339 aa6.64□□□□□ -1.35
CKS1BP1-201ENST00000555221 CDHR4A6H8M9 788 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 PRSS29PA6NIE9 313 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 ZNF785A8K8V0 405 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 BTN3A1O00481 513 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 CYP27B1O15528 508 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 FOXS1O43638 330 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 TBC1D4O60343 1298 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 IL18RAPO95256 599 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 SETSIPP0DME0 302 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 SERPINB3P29508 390 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 ADAMTS20P59510 1910 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms