RNA–Protein interactions for RNA: ENST00000555015.5

SRP54-AS1-202, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-202ENST00000555015 NCK2O43639 380 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 LILRB3O75022 631 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CXCL14O95715 111 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 DLATP10515 647 aaKnown RBP13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CA8P35219 290 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 AARSP49588 968 aaKnown RBP eCLIP13.93□□□□□ -0.183e-7■■■■■ 72.1
SRP54-AS1-202ENST00000555015 CASP4P49662 377 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CREMQ03060 361 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 ENPEPQ07075 957 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 ADAM9Q13443 819 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 COL19A1Q14993 1142 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 DUOXA2Q1HG44 320 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 FAM171A1Q5VUB5 890 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 KIAA0319Q5VV43 1072 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CEP135Q66GS9 1140 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 KIAA1841Q6NSI8 718 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PDXDC1Q6P996 788 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TAS1R1Q7RTX1 841 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 ADGRD2Q7Z7M1 963 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 USP37Q86T82 979 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 ZC3H3Q8IXZ2 948 aaKnown RBP13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 C1orf127Q8N9H9 656 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PPM1EQ8WY54 764 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CCDC127Q96BQ5 260 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 ANKRD36BP1Q96IX9 119 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TTPALQ9BTX7 342 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 MKNK1Q9BUB5 465 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 MTMR12Q9C0I1 747 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TLE6Q9H808 572 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 INTS13Q9NVM9 706 aa13.93□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TCF20Q9UGU0 1960 aaKnown RBP13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TULP1O00294 542 aaPredicted RBP13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PPEF2O14830 753 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 SYN3O14994 580 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CETN3O15182 167 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 SLC16A3O15427 465 aaKnown RBP13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 AKAP3O75969 853 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TNNC2P02585 160 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TNNI1P19237 187 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PTMSP20962 102 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 FGFR3P22607 806 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 IGFBP6P24592 240 aaPredicted RBP13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PSMC2P35998 433 aaKnown RBP13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PNPLA4P41247 253 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 BRCC3P46736 316 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 NRIP1P48552 1158 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 AP3M2P53677 418 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PMS1P54277 932 aaKnown RBP13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CLDN10P78369 228 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 FKBP3Q00688 224 aaKnown RBP13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 HYAL1Q12794 435 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PAK1Q13153 545 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 DUSP6Q16828 381 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 RTP2Q5QGT7 225 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 ANKRD40Q6AI12 368 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 KLHL10Q6JEL2 608 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 RBM43Q6ZSC3 357 aaKnown RBP13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 INTS8Q75QN2 995 aaKnown RBP13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TMEM130Q8N3G9 435 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PARD3BQ8TEW8 1205 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 NELFBQ8WX92 580 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 AUTS2Q8WXX7 1259 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PIK3R5Q8WYR1 880 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 SUSD3Q96L08 255 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 B3GALT6Q96L58 329 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 ZNF560Q96MR9 790 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 EMILIN2Q9BXX0 1053 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 GZF1Q9H116 711 aaPredicted RBP13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CTNND2Q9UQB3 1225 aa13.92□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TRIM49BA6NDI0 452 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 I3L4J1 428 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 M0QZQ0 153 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 C2CD2LO14523 706 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 ITGB3P05106 788 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TKTP29401 623 aaKnown RBP13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 POLR2BP30876 1174 aaKnown RBP13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TAF6P49848 677 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 LILRA4P59901 499 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CCDC183Q5T5S1 534 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 LMBRD2Q68DH5 695 aaPredicted RBP13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TTI2Q6NXR4 508 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 RBM23Q86U06 439 aaKnown RBP13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CEP57Q86XR8 500 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 FAM186BQ8IYM0 893 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 LRRC52Q8N7C0 313 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 EFHBQ8N7U6 833 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 MLKLQ8NB16 471 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 OR5B17Q8NGF7 314 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 CXorf38Q8TB03 319 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PLEKHO2Q8TD55 490 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 TMC2Q8TDI7 906 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 RIN2Q8WYP3 895 aaPredicted RBP13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PABPC5Q96DU9 382 aaKnown RBP13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 RXFP1Q9HBX9 757 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 FNIP2Q9P278 1114 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 PCDHB8Q9UN66 801 aa13.91□□□□□ -0.18
SRP54-AS1-202ENST00000555015 ARHGEF37A1IGU5 675 aa13.9□□□□□ -0.18
SRP54-AS1-202ENST00000555015 LRRIQ3A6PVS8 624 aaPredicted RBP13.9□□□□□ -0.18
SRP54-AS1-202ENST00000555015 IKBKBO14920 756 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms