RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 PRSS55Q6UWB4 352 aaPredicted RBP13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 PPFIBP1Q86W92 1011 aa13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 GUF1Q8N442 669 aaKnown RBP13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 RDH13Q8NBN7 331 aa13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 NOC3LQ8WTT2 800 aaKnown RBP13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 SUSD3Q96L08 255 aa13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 CLSTN3Q9BQT9 956 aa13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 DMAC2Q9NW81 257 aa13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 RMND1Q9NWS8 449 aa13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 DPP3Q9NY33 737 aa13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 FNIP2Q9P278 1114 aa13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 NUB1Q9Y5A7 615 aa13.99□□□□□ -0.17
MTHFD1-209ENST00000554768 GRXCR2A6NFK2 248 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 SPTLC1O15269 473 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 KIF20AO95235 890 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 C1RP00736 705 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 ADH1AP07327 375 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 RPL17P18621 184 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 TKTP29401 623 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 AARSP49588 968 aaKnown RBP eCLIP13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 LILRA4P59901 499 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 CLUL1Q15846 466 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 PUS10Q3MIT2 529 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 PTCRAQ6ISU1 281 aaPredicted RBP13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 ANKRD54Q6NXT1 300 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 PDXDC1Q6P996 788 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 LILRA6Q6PI73 481 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 SYCE2Q6PIF2 218 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 SLC9A9Q8IVB4 645 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 SMYD4Q8IYR2 804 aaPredicted RBP13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 CXorf38Q8TB03 319 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 CASP10Q92851 521 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 SMARCE1Q969G3 411 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 MFSD14AQ96MC6 490 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 S1PR5Q9H228 398 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 CD207Q9UJ71 328 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 TRAF3IP3Q9Y228 551 aa13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 TDRD15B5MCY1 1934 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-209ENST00000554768 M0QZQ0 153 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 TULP1O00294 542 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 SYN3O14994 580 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 ADAM12O43184 909 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 EXOC3O60645 756 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 SRGAP2BP0DMP2 458 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 HOXB8P17481 243 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 PAX3P23760 479 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 MCM4P33991 863 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 TFAMQ00059 246 aaKnown RBP13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 CREMQ03060 361 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 MRPL58Q14197 206 aaKnown RBP13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 MYBPC2Q14324 1141 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 SURF1Q15526 300 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 PSMD5Q16401 504 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 ZNF658Q5TYW1 1059 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 SCARA3Q6AZY7 606 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 RSPO2Q6UXX9 243 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 PALB2Q86YC2 1186 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 CACTINQ8WUQ7 758 aaKnown RBP13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 FAM84AQ96KN4 292 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 GZF1Q9H116 711 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 INTS13Q9NVM9 706 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 MTRRQ9UBK8 725 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 BACE2Q9Y5Z0 518 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 ATG2AQ2TAZ0 1938 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 MUC3AQ02505 3323 aa13.97□□□□□ -0.17
MTHFD1-209ENST00000554768 PTPRJQ12913 1337 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 TGM5O43548 720 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 TBC1D4O60343 1298 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 NR3C1P04150 777 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 PRCPP42785 496 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 CYP24A1Q07973 514 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 PSMD6Q15008 389 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 NFIL3Q16649 462 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 DUOXA2Q1HG44 320 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 COBLL1Q53SF7 1204 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 ANKS3Q6ZW76 656 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 C1orf127Q8N9H9 656 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 SMRP1Q8NCR6 262 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 APPL2Q8NEU8 664 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 OR5B17Q8NGF7 314 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 CCDC127Q96BQ5 260 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 BORCS6Q96GS4 357 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 POP1Q99575 1024 aaKnown RBP13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 PCDHB8Q9UN66 801 aa13.96□□□□□ -0.17
MTHFD1-209ENST00000554768 MBTPS2O43462 519 aa13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 CALUO43852 315 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 OAZ2O95190 189 aa13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 GLUD1P00367 558 aa13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 ITGB3P05106 788 aa13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 SPATA31D3P0C874 917 aa13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 OR1D2P34982 312 aa13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 CASP4P49662 377 aa13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 SMAD4Q13485 552 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 RAB33AQ14088 237 aa13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 SMAD2Q15796 467 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 LMBRD2Q68DH5 695 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 DSTYKQ6XUX3 929 aa13.95□□□□□ -0.18
MTHFD1-209ENST00000554768 SPATA31D4Q6ZUB0 917 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms