RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 PRSS55Q6UWB4 352 aaPredicted RBP13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 PPFIBP1Q86W92 1011 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 GUF1Q8N442 669 aaKnown RBP13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 RDH13Q8NBN7 331 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 NOC3LQ8WTT2 800 aaKnown RBP13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 SUSD3Q96L08 255 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 CLSTN3Q9BQT9 956 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 DMAC2Q9NW81 257 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 RMND1Q9NWS8 449 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 DPP3Q9NY33 737 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 FNIP2Q9P278 1114 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 NUB1Q9Y5A7 615 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 GRXCR2A6NFK2 248 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 SPTLC1O15269 473 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 KIF20AO95235 890 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 C1RP00736 705 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 ADH1AP07327 375 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 RPL17P18621 184 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 TKTP29401 623 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 AARSP49588 968 aaKnown RBP eCLIP13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 LILRA4P59901 499 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 CLUL1Q15846 466 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 PUS10Q3MIT2 529 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 PTCRAQ6ISU1 281 aaPredicted RBP13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 ANKRD54Q6NXT1 300 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 PDXDC1Q6P996 788 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 LILRA6Q6PI73 481 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 SYCE2Q6PIF2 218 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 SLC9A9Q8IVB4 645 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 SMYD4Q8IYR2 804 aaPredicted RBP13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 CXorf38Q8TB03 319 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 CASP10Q92851 521 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 SMARCE1Q969G3 411 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 MFSD14AQ96MC6 490 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 S1PR5Q9H228 398 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 CD207Q9UJ71 328 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 TRAF3IP3Q9Y228 551 aa13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 TDRD15B5MCY1 1934 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-208ENST00000554739 M0QZQ0 153 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 TULP1O00294 542 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 SYN3O14994 580 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 ADAM12O43184 909 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 EXOC3O60645 756 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 SRGAP2BP0DMP2 458 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 HOXB8P17481 243 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 PAX3P23760 479 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 MCM4P33991 863 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 TFAMQ00059 246 aaKnown RBP13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 CREMQ03060 361 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 MRPL58Q14197 206 aaKnown RBP13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 MYBPC2Q14324 1141 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 SURF1Q15526 300 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 PSMD5Q16401 504 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 ZNF658Q5TYW1 1059 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 SCARA3Q6AZY7 606 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 RSPO2Q6UXX9 243 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 PALB2Q86YC2 1186 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 CACTINQ8WUQ7 758 aaKnown RBP13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 FAM84AQ96KN4 292 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 GZF1Q9H116 711 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 INTS13Q9NVM9 706 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 MTRRQ9UBK8 725 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 BACE2Q9Y5Z0 518 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 ATG2AQ2TAZ0 1938 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 MUC3AQ02505 3323 aa13.97□□□□□ -0.17
MTHFD1-208ENST00000554739 PTPRJQ12913 1337 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 TGM5O43548 720 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 TBC1D4O60343 1298 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 NR3C1P04150 777 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 PRCPP42785 496 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 CYP24A1Q07973 514 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 PSMD6Q15008 389 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 NFIL3Q16649 462 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 DUOXA2Q1HG44 320 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 COBLL1Q53SF7 1204 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 ANKS3Q6ZW76 656 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 C1orf127Q8N9H9 656 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 SMRP1Q8NCR6 262 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 APPL2Q8NEU8 664 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 OR5B17Q8NGF7 314 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 CCDC127Q96BQ5 260 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 BORCS6Q96GS4 357 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 POP1Q99575 1024 aaKnown RBP13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 PCDHB8Q9UN66 801 aa13.96□□□□□ -0.17
MTHFD1-208ENST00000554739 MBTPS2O43462 519 aa13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 CALUO43852 315 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 OAZ2O95190 189 aa13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 GLUD1P00367 558 aa13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 ITGB3P05106 788 aa13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 SPATA31D3P0C874 917 aa13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 OR1D2P34982 312 aa13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 CASP4P49662 377 aa13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 SMAD4Q13485 552 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 RAB33AQ14088 237 aa13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 SMAD2Q15796 467 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 LMBRD2Q68DH5 695 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 DSTYKQ6XUX3 929 aa13.95□□□□□ -0.18
MTHFD1-208ENST00000554739 SPATA31D4Q6ZUB0 917 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms