RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 IGFBP4P22692 258 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 IRS1P35568 1242 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 AARSP49588 968 aaKnown RBP eCLIP23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 VAMP7P51809 220 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 ELAVL2Q12926 359 aaKnown RBP23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 BFSP1Q12934 665 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 STX1AQ16623 288 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 C1orf220Q5T0J3 134 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 TAS1R1Q7RTX1 841 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 FILIP1Q7Z7B0 1213 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 USP37Q86T82 979 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 TCF25Q9BQ70 676 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 NGRNQ9NPE2 291 aaKnown RBP23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 CHST7Q9NS84 486 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 SIX4Q9UIU6 781 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 PLXNA4Q9HCM2 1894 aa23.15■■□□□ 1.3
SDR39U1-208ENST00000554698 IKBKBO14920 756 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 TRAPPC3O43617 180 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 ITGB3P05106 788 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 CTSAP10619 480 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 KRT13P13646 458 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 FOSL2P15408 326 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 PAX3P23760 479 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 AP3M2P53677 418 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 TRAPPC11Q7Z392 1133 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 TMC7Q7Z402 723 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 ANO10Q9NW15 660 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 NUB1Q9Y5A7 615 aa23.14■■□□□ 1.3
SDR39U1-208ENST00000554698 LETM1O95202 739 aaPredicted RBP23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 POLR2BP30876 1174 aaKnown RBP23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 BRCC3P46736 316 aa23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 LILRA4P59901 499 aa23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 TIGD5Q53EQ6 642 aa23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 SCARA3Q6AZY7 606 aa23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 SUSD3Q96L08 255 aa23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 SRRTQ9BXP5 876 aaKnown RBP23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 ENTPD7Q9NQZ7 604 aa23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 PCDHGC5Q9Y5F6 944 aa23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 IRAK3Q9Y616 596 aa23.14■■□□□ 1.29
SDR39U1-208ENST00000554698 SPTLC1O15269 473 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 CSPG5O95196 566 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 FGFR3P22607 806 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 RBP5P82980 135 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 DSG1Q02413 1049 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 TYRO3Q06418 890 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 SMC1AQ14683 1233 aaKnown RBP23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 USP41Q3LFD5 358 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 FAM171A1Q5VUB5 890 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 KIAA0319Q5VV43 1072 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 FRMD5Q7Z6J6 570 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 GPR65Q8IYL9 337 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 LRRC52Q8N7C0 313 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 MRPL43Q8N983 215 aaKnown RBP23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 MICAL1Q8TDZ2 1067 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 METTL14Q9HCE5 456 aaKnown RBP23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 ARMCX3Q9UH62 379 aaPredicted RBP23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 AGAP1Q9UPQ3 857 aa23.13■■□□□ 1.29
SDR39U1-208ENST00000554698 MYO9BQ13459 2157 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 I3L4J1 428 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 LILRB3O75022 631 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 FGFR1OPO95684 399 aaKnown RBP23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 C4BPAP04003 597 aaKnown RBP23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 TRIM49P0CI25 452 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 TRIM49CP0CI26 452 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 PNPLA4P41247 253 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 GLUD2P49448 558 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 BMS1Q14692 1282 aaKnown RBP23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 PTPN14Q15678 1187 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 PLPP4Q5VZY2 271 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 C15orf39Q6ZRI6 1047 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 B3GALT6Q96L58 329 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 TTPALQ9BTX7 342 aa23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 NSUN3Q9H649 340 aaKnown RBP23.12■■□□□ 1.29
SDR39U1-208ENST00000554698 C2orf71A6NGG8 1288 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 HIDE1A8MVS5 230 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 M0QZQ0 153 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 CXCL14O95715 111 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 GNA14O95837 355 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 URODP06132 367 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 KRT19P08727 400 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 TAF6P49848 677 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 MARSP56192 900 aaKnown RBP23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 ZACNQ401N2 412 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 RTP2Q5QGT7 225 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 TDRD10Q5VZ19 366 aaKnown RBP23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 C11orf57Q6ZUT1 292 aaPredicted RBP23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 AUTS2Q8WXX7 1259 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 ZNF560Q96MR9 790 aa23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 MRPL17Q9NRX2 175 aaKnown RBP23.11■■□□□ 1.29
SDR39U1-208ENST00000554698 SYN3O14994 580 aa23.1■■□□□ 1.29
SDR39U1-208ENST00000554698 GTF2H1P32780 548 aa23.1■■□□□ 1.29
SDR39U1-208ENST00000554698 PPP3CAQ08209 521 aa23.1■■□□□ 1.29
SDR39U1-208ENST00000554698 SV2CQ496J9 727 aa23.1■■□□□ 1.29
SDR39U1-208ENST00000554698 CCDC40Q4G0X9 1142 aa23.1■■□□□ 1.29
SDR39U1-208ENST00000554698 KIAA1841Q6NSI8 718 aa23.1■■□□□ 1.29
SDR39U1-208ENST00000554698 SV2AQ7L0J3 742 aa23.1■■□□□ 1.29
SDR39U1-208ENST00000554698 SLC35C1Q96A29 364 aa23.1■■□□□ 1.29
SDR39U1-208ENST00000554698 FUCA2Q9BTY2 467 aa23.1■■□□□ 1.29
SDR39U1-208ENST00000554698 PCDHB8Q9UN66 801 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms