RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 FBXL21Q9UKT6 434 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 MAFFQ9ULX9 164 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 UBQLN1Q9UMX0 589 aaKnown RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 POLIQ9UNA4 740 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 STYXL1Q9Y6J8 313 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 WDR27A2RRH5 827 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 K7ENM7 598 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 HNRNPDLO14979 420 aaKnown RBP12.1□□□□□ -0.47
ABCD4-221ENST00000554453 XPOTO43592 962 aaKnown RBP12.1□□□□□ -0.47
ABCD4-221ENST00000554453 OAZ2O95190 189 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 PTPN2P17706 415 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 AOC1P19801 751 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 PAX3P23760 479 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 MCM4P33991 863 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 AARSP49588 968 aaKnown RBP eCLIP12.1□□□□□ -0.47
ABCD4-221ENST00000554453 POU5F1Q01860 360 aaKnown RBP12.1□□□□□ -0.47
ABCD4-221ENST00000554453 SPAG1Q07617 926 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 ENOX2Q16206 610 aaKnown RBP12.1□□□□□ -0.47
ABCD4-221ENST00000554453 CTXN3Q4LDR2 81 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 RRAGBQ5VZM2 374 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 SLFN12LQ6IEE8 588 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 SLC39A4Q6P5W5 647 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 SV2BQ7L1I2 683 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 SIX5Q8N196 739 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 FLCNQ8NFG4 579 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 ITFG1Q8TB96 612 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 CLIC6Q96NY7 704 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 PHOX2BQ99453 314 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 ZHX3Q9H4I2 956 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 SLC2A4RGQ9NR83 387 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 CPSF3Q9UKF6 684 aaKnown RBP12.1□□□□□ -0.47
ABCD4-221ENST00000554453 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 MTMR6Q9Y217 621 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 SCN1AP35498 2009 aa12.1□□□□□ -0.47
ABCD4-221ENST00000554453 KRBA1A5PL33 1030 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 ANKRD63C9JTQ0 380 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 H0Y858 1186 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 TBCAO75347 108 aaKnown RBP12.09□□□□□ -0.47
ABCD4-221ENST00000554453 SEC24AO95486 1093 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 RHOP08100 348 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 CFHP08603 1231 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 ARPP19P56211 112 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 PPP2R3AQ06190 1150 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 POSTNQ15063 836 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 PABPC1LQ4VXU2 614 aaKnown RBP12.09□□□□□ -0.47
ABCD4-221ENST00000554453 ZC2HC1CQ53FD0 456 aaPredicted RBP12.09□□□□□ -0.47
ABCD4-221ENST00000554453 ZBTB41Q5SVQ8 909 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 SPATA1Q5VX52 437 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 CWF19L1Q69YN2 538 aaKnown RBP12.09□□□□□ -0.47
ABCD4-221ENST00000554453 PHLDB3Q6NSJ2 640 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 PARM1Q6UWI2 310 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 MAP4K3Q8IVH8 894 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 ATOH1Q92858 354 aaPredicted RBP12.09□□□□□ -0.47
ABCD4-221ENST00000554453 FGF14Q92915 247 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 DNAJC19Q96DA6 116 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 USP28Q96RU2 1077 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 MSTO1Q9BUK6 570 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 STRA6Q9BX79 667 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 OXCT2Q9BYC2 517 aaPredicted RBP12.09□□□□□ -0.47
ABCD4-221ENST00000554453 ASB7Q9H672 318 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 HCFC1R1Q9NWW0 138 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 GDE1Q9NZC3 331 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 SEL1LQ9UBV2 794 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 TUBGCP4Q9UGJ1 667 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 AFF4Q9UHB7 1163 aaKnown RBP12.09□□□□□ -0.47
ABCD4-221ENST00000554453 NUMBLQ9Y6R0 609 aa12.09□□□□□ -0.47
ABCD4-221ENST00000554453 ZFHX2Q9C0A1 2572 aaPredicted RBP12.08□□□□□ -0.48
ABCD4-221ENST00000554453 MYMKA6NI61 221 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 K7ELQ4 463 aaPredicted RBP12.08□□□□□ -0.48
ABCD4-221ENST00000554453 PRRG1O14668 218 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 STX6O43752 255 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 MICAL2O94851 1124 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 LRG1P02750 347 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 LILRA4P59901 499 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 GPC5P78333 572 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 CEBPZQ03701 1054 aaKnown RBP12.08□□□□□ -0.48
ABCD4-221ENST00000554453 ADCY1Q08828 1119 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 ZNF280DQ6N043 979 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 MTSS1LQ765P7 747 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 DYMQ7RTS9 669 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 TMEM130Q8N3G9 435 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 BEST2Q8NFU1 509 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 GPR152Q8TDT2 470 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 SNX21Q969T3 373 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 HVCN1Q96D96 273 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 PANK2Q9BZ23 570 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 CYP4F11Q9HBI6 524 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 DERAQ9Y315 318 aa12.08□□□□□ -0.48
ABCD4-221ENST00000554453 MRPS23Q9Y3D9 190 aaKnown RBP12.08□□□□□ -0.48
ABCD4-221ENST00000554453 EP300Q09472 2414 aaPredicted RBP12.08□□□□□ -0.48
ABCD4-221ENST00000554453 ANO9A1A5B4 782 aa12.07□□□□□ -0.48
ABCD4-221ENST00000554453 PROB1E7EW31 1015 aa12.07□□□□□ -0.48
ABCD4-221ENST00000554453 STK25O00506 426 aa12.07□□□□□ -0.48
ABCD4-221ENST00000554453 PIRO00625 290 aa12.07□□□□□ -0.48
ABCD4-221ENST00000554453 ZNF197O14709 1029 aa12.07□□□□□ -0.48
ABCD4-221ENST00000554453 PPP1R37O75864 691 aa12.07□□□□□ -0.48
ABCD4-221ENST00000554453 GAP43P17677 238 aa12.07□□□□□ -0.48
ABCD4-221ENST00000554453 TYMPP19971 482 aa12.07□□□□□ -0.48
ABCD4-221ENST00000554453 TXLNAP40222 546 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms