RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SORCS3Q9UPU3 1222 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 STYXL1Q9Y6J8 313 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 DOCK6Q96HP0 2047 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 KMT2EQ8IZD2 1858 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 CLUHO75153 1309 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 FRMD3A2A2Y4 597 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 RFPL2O75678 378 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 F13A1P00488 732 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 SP100P23497 879 aaPredicted RBP11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 NMT1P30419 496 aaKnown RBP11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 LRPAP1P30533 357 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 MTMR3Q13615 1198 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 ALCAMQ13740 583 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 ZBTB6Q15916 424 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 UVSSAQ2YD98 709 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 SEZ6Q53EL9 994 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 LIN9Q5TKA1 542 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 SLFN12LQ6IEE8 588 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 SLC8B1Q6J4K2 584 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 SLC39A4Q6P5W5 647 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 DYMQ7RTS9 669 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 ZNF720Q7Z2F6 126 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 SFR1Q86XK3 245 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 GLYCTKQ8IVS8 523 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 KCNG4Q8TDN1 519 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 SMG7Q92540 1137 aaKnown RBP11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 C18orf25Q96B23 403 aaPredicted RBP11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 SUSD3Q96L08 255 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 MFSD14AQ96MC6 490 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 STRA6Q9BX79 667 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 PRKD2Q9BZL6 878 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 LRRC27Q9C0I9 530 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 TNMDQ9H2S6 317 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 CUEDC2Q9H467 287 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 RPF1Q9H9Y2 349 aaKnown RBP11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 UBQLN1Q9UMX0 589 aaKnown RBP11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 NUB1Q9Y5A7 615 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
PTCD2P1-201ENST00000554393 TSC2P49815 1807 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 A0A087X0B3 334 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 TMEM221A6NGB7 291 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 M0R296 226 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 CUTAO60888 179 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 SPATA31D3P0C874 917 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 PAX3P23760 479 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 IGFBP6P24592 240 aaPredicted RBP11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 TKTP29401 623 aaKnown RBP11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 OR1D2P34982 312 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 TNFSF9P41273 254 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 BRCC3P46736 316 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 POSTNQ15063 836 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 ENOX2Q16206 610 aaKnown RBP11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 ZC2HC1CQ53FD0 456 aaPredicted RBP11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 SPATA31D4Q6ZUB0 917 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 HFE2Q6ZVN8 426 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 FEZF2Q8TBJ5 459 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 MSTO1Q9BUK6 570 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 MRPL44Q9H9J2 332 aaKnown RBP11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 PIDD1Q9HB75 910 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 TUBGCP4Q9UGJ1 667 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 CPSF3Q9UKF6 684 aaKnown RBP11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 EXOC7Q9UPT5 735 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 DERAQ9Y315 318 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 TCHHQ07283 1943 aa11.32□□□□□ -0.6
PTCD2P1-201ENST00000554393 NOTCH4Q99466 2003 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 LACTBL1A8MY62 500 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 H7C4K7 107 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 I3L4J1 428 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 DPYSL4O14531 572 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 ADAM12O43184 909 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 TBC1D4O60343 1298 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 XYLBO75191 536 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 C8AP07357 584 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 AARSP49588 968 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 MRPL58Q14197 206 aaKnown RBP11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 PPM1LQ5SGD2 360 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 L1TD1Q5T7N2 865 aaKnown RBP11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 ADALQ6DHV7 355 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 CNNM4Q6P4Q7 775 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 APPL2Q8NEU8 664 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 ASIC4Q96FT7 647 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 ACCSQ96QU6 501 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 PHOX2BQ99453 314 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 OXCT2Q9BYC2 517 aaPredicted RBP11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 ASB7Q9H672 318 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 MAGEF1Q9HAY2 307 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 KBTBD4Q9NVX7 518 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 IGSF9Q9P2J2 1179 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 TFIP11Q9UBB9 837 aaKnown RBP11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 EPS15L1Q9UBC2 864 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 AGO2Q9UKV8 859 aaKnown RBP11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 CFAP45Q9UL16 551 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 MAFFQ9ULX9 164 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 C2CD2Q9Y426 696 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 CDY1Q9Y6F8 540 aa11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
PTCD2P1-201ENST00000554393 SCN1AP35498 2009 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms