RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CUEDC2Q9H467 287 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 YY1AP1Q9H869 796 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 SP110Q9HB58 689 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 DDX4Q9NQI0 724 aaKnown RBP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 INTS13Q9NVM9 706 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 TMEM51Q9NW97 253 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 ANAPC4Q9UJX5 808 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 L1RE1Q9UN81 338 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 DOCK1Q14185 1865 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 MAST2Q6P0Q8 1798 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 GPR75-ASB3A0A0A6YYF3 556 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 LAD1O00515 517 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 POLR3GO15318 223 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 POLR2DO15514 142 aaKnown RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 PRPF3O43395 683 aaKnown RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 KRT86O43790 486 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 MSCO60682 206 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 APPP05067 770 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 EPHX1P07099 455 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 ZGLP1P0C6A0 271 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 CALML3P27482 149 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 CYLC1P35663 651 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 MAGEA9P43362 315 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 HAND2P61296 217 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 CDK17Q00537 523 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 ORC2Q13416 577 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 CUL4BQ13620 913 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 CCDC178Q5BJE1 867 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 FIGNQ5HY92 759 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 GALNT17Q6IS24 598 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 KIAA1211LQ6NV74 962 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 VHLLQ6RSH7 139 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 CRTC3Q6UUV7 619 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 TOGARAM2Q6ZUX3 1019 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 CHST3Q7LGC8 479 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 TBC1D10CQ8IV04 446 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 EFCAB13Q8IY85 973 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 CCDC170Q8IYT3 715 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 CRACR2BQ8N4Y2 399 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 ZNF513Q8N8E2 541 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 ESR2Q92731 530 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 FGD4Q96M96 766 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 STRBPQ96SI9 672 aaKnown RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 CDX2Q99626 313 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 TACO1Q9BSH4 297 aaKnown RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 UBAC1Q9BSL1 405 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 PUS7LQ9H0K6 701 aaKnown RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 TMOD4Q9NZQ9 345 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 ABCF2Q9UG63 623 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 FEZ2Q9UHY8 353 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 HERC5Q9UII4 1024 aaKnown RBP6.5□□□□□ -1.37
VPS33B-203ENST00000554264 TCFL5Q9UL49 500 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 MYO6Q9UM54 1294 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 ZNF532Q9HCE3 1301 aa6.5□□□□□ -1.37
VPS33B-203ENST00000554264 PTPRFP10586 1907 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 PHIPQ8WWQ0 1821 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 TCRBV5S4A2TA0A5A2 114 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 BICDL2A1A5D9 508 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 SRRM3A6NNA2 597 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 B2RBV5 119 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 C19orf81C9J6K1 198 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 TMEM232C9JQI7 657 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 MYO1CO00159 1063 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 N4BP3O15049 544 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 OPA1O60313 960 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 RANBP6O60518 1105 aaKnown RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 PPFIA4O75335 1185 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 LDHCP07864 332 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 ASNSP08243 561 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 SYPP08247 313 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 PRLRP16471 622 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 CCND3P30281 292 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 LONP1P36776 959 aaKnown RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 GDNFP39905 211 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 PHKA1P46020 1223 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 LMAN1P49257 510 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 HK2P52789 917 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 ADKP55263 362 aaKnown RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 BACE1P56817 501 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 RHBDL3P58872 404 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 HERVK_113P62684 666 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 CCNA1P78396 465 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 GSTO1P78417 241 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 SMAD3P84022 425 aaKnown RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 ATP2C1P98194 919 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 PAK1Q13153 545 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 KCNB1Q14721 858 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 CASP8Q14790 479 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 ZNF569Q5MCW4 686 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 ZNF658Q5TYW1 1059 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 MFSD14CQ5VZR4 134 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 FOXR2Q6PJQ5 311 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 CYB5R4Q7L1T6 521 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 GPR142Q7Z601 462 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 PLEKHH3Q7Z736 793 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 ATG4DQ86TL0 474 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 FOXP4Q8IVH2 680 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms