RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 RAVER2Q9HCJ3 691 aaKnown RBP12.89□□□□□ -0.35
SPTB-206ENST00000553938 DNAAF2Q9NVR5 837 aaKnown RBP12.89□□□□□ -0.35
SPTB-206ENST00000553938 PCYOX1Q9UHG3 505 aa12.89□□□□□ -0.35
SPTB-206ENST00000553938 GOLGA8SH3BPF8 625 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 GOLGA8MH3BSY2 632 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 SNX3O60493 162 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 FOSP01100 380 aaPredicted RBP12.88□□□□□ -0.35
SPTB-206ENST00000553938 RALAP11233 206 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 CYFIP1Q7L576 1253 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 HOOK3Q86VS8 718 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 UBE2OQ9C0C9 1292 aaKnown RBP12.88□□□□□ -0.35
SPTB-206ENST00000553938 LAMA2P24043 3122 aaKnown RBP12.88□□□□□ -0.35
SPTB-206ENST00000553938 ZNF536O15090 1300 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
SPTB-206ENST00000553938 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 MGRN1O60291 552 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 CHRNA3P32297 505 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 MXRA7P84157 204 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 UBL4BQ8N7F7 174 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 EIF1ADQ8N9N8 165 aaKnown RBP12.88□□□□□ -0.35
SPTB-206ENST00000553938 ZNF516Q92618 1163 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 ECT2Q9H8V3 914 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 EBF2Q9HAK2 575 aa12.88□□□□□ -0.35
SPTB-206ENST00000553938 DHX34Q14147 1143 aaKnown RBP12.87□□□□□ -0.35
SPTB-206ENST00000553938 LACTB2Q53H82 288 aaPredicted RBP12.87□□□□□ -0.35
SPTB-206ENST00000553938 ACBD5Q5T8D3 534 aaPredicted RBP12.87□□□□□ -0.35
SPTB-206ENST00000553938 ERICH1Q86X53 443 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 CCDC63Q8NA47 563 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 XXYLT1Q8NBI6 393 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 TAAR1Q96RJ0 339 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 NAP1L4Q99733 375 aaKnown RBP12.87□□□□□ -0.35
SPTB-206ENST00000553938 EGFRP00533 1210 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 BCRP11274 1271 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 DSG3P32926 999 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 TUBP50607 506 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 EFTUD2Q15029 972 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPTB-206ENST00000553938 ZNF568Q3ZCX4 644 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 ZBTB45Q96K62 511 aaPredicted RBP12.87□□□□□ -0.35
SPTB-206ENST00000553938 MKNK1Q9BUB5 465 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 TEKT3Q9BXF9 490 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 OCEL1Q9H607 264 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 ACTR5Q9H9F9 607 aaPredicted RBP12.87□□□□□ -0.35
SPTB-206ENST00000553938 PIK3CDO00329 1044 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 YWHABP31946 246 aaKnown RBP12.87□□□□□ -0.35
SPTB-206ENST00000553938 C11orf63Q6NUN7 778 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 SV2AQ7L0J3 742 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 C4orf33Q8N1A6 199 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 TEKT4Q8WW24 435 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 C11orf70Q9BRQ4 267 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 NINJ2Q9NZG7 142 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 ZFATQ9P243 1243 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
SPTB-206ENST00000553938 FAM187AA6NFU0 413 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 A6NNZ2 444 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 PDHA1P08559 390 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 ACOT2P49753 483 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 TUBB8Q3ZCM7 444 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 TNFAIP8L3Q5GJ75 292 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 BTNL9Q6UXG8 535 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 RHOT2Q8IXI1 618 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 RBM12BQ8IXT5 1001 aaKnown RBP12.86□□□□□ -0.35
SPTB-206ENST00000553938 LRRN4Q8WUT4 740 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPTB-206ENST00000553938 TSPAN18Q96SJ8 248 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 FAM213AQ9BRX8 229 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 ALG13Q9NP73 1137 aaKnown RBP12.86□□□□□ -0.35
SPTB-206ENST00000553938 CCPG1Q9ULG6 757 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 ZMYND8Q9ULU4 1186 aaPredicted RBP12.86□□□□□ -0.35
SPTB-206ENST00000553938 AFF2P51816 1311 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 EDN1P05305 212 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 RARGP13631 454 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 BRAFP15056 766 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 RPL7AP62424 266 aaKnown RBP12.86□□□□□ -0.35
SPTB-206ENST00000553938 ANO5Q75V66 913 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 SHC3Q92529 594 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 UTP4Q969X6 686 aaKnown RBP12.86□□□□□ -0.35
SPTB-206ENST00000553938 MASTLQ96GX5 879 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 ZNF668Q96K58 619 aaPredicted RBP12.86□□□□□ -0.35
SPTB-206ENST00000553938 MXRA8Q9BRK3 442 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 TTLL13PA6NNM8 815 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 ZNF189O75820 626 aaPredicted RBP12.86□□□□□ -0.35
SPTB-206ENST00000553938 DNAJC3Q13217 504 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 DRP2Q13474 957 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 TMED2Q15363 201 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 XKR9Q5GH70 373 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 RHBDF2Q6PJF5 856 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 KLF6Q99612 283 aaPredicted RBP12.86□□□□□ -0.35
SPTB-206ENST00000553938 PCMTD2Q9NV79 361 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 SAMD15Q9P1V8 674 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 NKX1-2Q9UD57 310 aaPredicted RBP12.86□□□□□ -0.35
SPTB-206ENST00000553938 GTF3C4Q9UKN8 822 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 RIPK3Q9Y572 518 aa12.86□□□□□ -0.35
SPTB-206ENST00000553938 DENND3A2RUS2 1198 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 OAS1P00973 400 aaKnown RBP12.85□□□□□ -0.35
SPTB-206ENST00000553938 FDX1P10109 184 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 NPR1P16066 1061 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 ADCY8P40145 1251 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 NPTX2P47972 431 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 GCLCP48506 637 aaPredicted RBP12.85□□□□□ -0.35
SPTB-206ENST00000553938 EIF3BP55884 814 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms