RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TRIM44Q96DX7 344 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-208ENST00000553868 PRIMPOLQ96LW4 560 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 CDCA3Q99618 268 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-208ENST00000553868 GCOM2Q9BZD3 368 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-208ENST00000553868 FAM49AQ9H0Q0 323 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-208ENST00000553868 FZD8Q9H461 694 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 ASPMQ8IZT6 3477 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 A0A087WZ62 844 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 A0A1W2PQC6 194 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 ANKRD63C9JTQ0 380 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 M0QZ92 97 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 ACKR2O00590 384 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 LDHAP00338 332 aaKnown RBP15.68■□□□□ 0.1
SHMT2-208ENST00000553868 TPM1P09493 284 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 MATR3P43243 847 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHMT2-208ENST00000553868 GSDMDP57764 484 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 NLRP11P59045 1033 aaKnown RBP15.68■□□□□ 0.1
SHMT2-208ENST00000553868 ENPEPQ07075 957 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 NCBP1Q09161 790 aaKnown RBP15.68■□□□□ 0.1
SHMT2-208ENST00000553868 PRPF4BQ13523 1007 aaKnown RBP15.68■□□□□ 0.1
SHMT2-208ENST00000553868 TMEM132AQ24JP5 1023 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 SPECC1LQ69YQ0 1117 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 INTS8Q75QN2 995 aaKnown RBP15.68■□□□□ 0.1
SHMT2-208ENST00000553868 TMC6Q7Z403 805 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 APBB1IPQ7Z5R6 666 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-208ENST00000553868 SPC24Q8NBT2 197 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 FDXACB1Q9BRP7 624 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-208ENST00000553868 CBWD1Q9BRT8 395 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 NDST4Q9H3R1 872 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 AGO3Q9H9G7 860 aaKnown RBP15.68■□□□□ 0.1
SHMT2-208ENST00000553868 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHMT2-208ENST00000553868 STYXL1Q9Y6J8 313 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 ITIH6Q6UXX5 1313 aa15.68■□□□□ 0.1
SHMT2-208ENST00000553868 HIDE1A8MVS5 230 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 FSCN2O14926 492 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 TOM1L1O75674 476 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 FGF18O76093 207 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 SRGAP2BP0DMP2 458 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 MBTD1Q05BQ5 628 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 MGAT3Q09327 533 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 TRIM14Q14142 442 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 KIAA0319Q5VV43 1072 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 SIX5Q8N196 739 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 GPD1LQ8N335 351 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 FEZF2Q8TBJ5 459 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 COL26A1Q96A83 441 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 IQCDQ96DY2 449 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 RTP3Q9BQQ7 232 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 TARS2Q9BW92 718 aaKnown RBP15.67■□□□□ 0.1
SHMT2-208ENST00000553868 IKZF4Q9H2S9 585 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 PCIF1Q9H4Z3 704 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 IFT122Q9HBG6 1241 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 INTS13Q9NVM9 706 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 ANKRD11Q6UB99 2663 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-208ENST00000553868 FANCMQ8IYD8 2048 aa15.67■□□□□ 0.1
SHMT2-208ENST00000553868 CLDN3O15551 220 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 EXTL3O43909 919 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 STX10O60499 249 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 ERLIN2O94905 339 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 AFPP02771 609 aaKnown RBP15.66■□□□□ 0.1
SHMT2-208ENST00000553868 CD52P31358 61 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 CASP4P49662 377 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 HS1BP3Q53T59 392 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 DCAF17Q5H9S7 520 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-208ENST00000553868 MIIPQ5JXC2 388 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 FBXO47Q5MNV8 452 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 SPOUT1Q5T280 376 aaKnown RBP15.66■□□□□ 0.1
SHMT2-208ENST00000553868 ATF7IP2Q5U623 682 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 TCERG1LQ5VWI1 586 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 SLC39A4Q6P5W5 647 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 TSHZ1Q6ZSZ6 1077 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 PPFIBP1Q86W92 1011 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 NPAS4Q8IUM7 802 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 TDRD5Q8NAT2 981 aaKnown RBP15.66■□□□□ 0.1
SHMT2-208ENST00000553868 DNAJB3Q8WWF6 145 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 ACO2Q99798 780 aaKnown RBP15.66■□□□□ 0.1
SHMT2-208ENST00000553868 TCHPQ9BT92 498 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 ANKFY1Q9P2R3 1169 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 AGO2Q9UKV8 859 aaKnown RBP15.66■□□□□ 0.1
SHMT2-208ENST00000553868 CNTNAP2Q9UHC6 1331 aa15.66■□□□□ 0.1
SHMT2-208ENST00000553868 A0A0B4J269 797 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 ZNF233A6NK53 670 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 TISP43B9A030 160 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 TEX33O43247 280 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 N4BP1O75113 896 aaKnown RBP15.65■□□□□ 0.1
SHMT2-208ENST00000553868 ADRB1P08588 477 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 HOXB8P17481 243 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-208ENST00000553868 ADSSP30520 456 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 PBX1P40424 430 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 CRYBB1P53674 252 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-208ENST00000553868 UBE3AQ05086 875 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 BFSP1Q12934 665 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 SNRNP35Q16560 246 aaKnown RBP15.65■□□□□ 0.1
SHMT2-208ENST00000553868 KYAT1Q16773 422 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 KIZQ2M2Z5 673 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 MPZL3Q6UWV2 235 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 ZDHHC14Q8IZN3 488 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 C12orf76Q8N812 135 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-208ENST00000553868 SUMF1Q8NBK3 374 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 BORCS6Q96GS4 357 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms