RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 HMGB1P09429 215 aaKnown RBP10.02□□□□□ -0.81
PRKCH-208ENST00000553846 GCFC2P16383 781 aaKnown RBP10.02□□□□□ -0.81
PRKCH-208ENST00000553846 PDIA3P30101 505 aaKnown RBP10.02□□□□□ -0.81
PRKCH-208ENST00000553846 BRCC3P46736 316 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 NCBP1Q09161 790 aaKnown RBP10.02□□□□□ -0.81
PRKCH-208ENST00000553846 LRRC32Q14392 662 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 KRT32Q14532 448 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 XKR4Q5GH76 650 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 DGKKQ5KSL6 1271 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 EEF1DP3Q658K8 133 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 TCEAL6Q6IPX3 200 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 C1orf228Q6PIY5 440 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 OTUD6AQ7L8S5 288 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 BEST2Q8NFU1 509 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 SHKBP1Q8TBC3 707 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 ZSCAN18Q8TBC5 510 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-208ENST00000553846 BSNDQ8WZ55 320 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 TCEAL3Q969E4 200 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 POLR3FQ9H1D9 316 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-208ENST00000553846 C8orf33Q9H7E9 229 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-208ENST00000553846 GOLGA2P5Q9HBQ8 144 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 GPRC5CQ9NQ84 441 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 ANKEF1Q9NU02 776 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 NUP205Q92621 2012 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 MYO16Q9Y6X6 1858 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 SOBPA7XYQ1 873 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 ZNF197O14709 1029 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 ZNF263O14978 683 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 AKAP3O75969 853 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 LRG1P02750 347 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 CAPNS1P04632 268 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 PRKCBP05771 671 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 GJA1P17302 382 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 SPINK2P20155 84 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 MPLP40238 635 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 RING1Q06587 406 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 EARS2Q5JPH6 523 aaKnown RBP10.01□□□□□ -0.81
PRKCH-208ENST00000553846 GLRA4Q5JXX5 417 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 GALNT17Q6IS24 598 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 LRSAM1Q6UWE0 723 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 ALKAL1Q6UXT8 129 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 PDZD4Q76G19 769 aaPredicted RBP10.01□□□□□ -0.81
PRKCH-208ENST00000553846 CACNA2D4Q7Z3S7 1137 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 RALGPS2Q86X27 583 aaPredicted RBP10.01□□□□□ -0.81
PRKCH-208ENST00000553846 NOSTRINQ8IVI9 506 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 SYNPOQ8N3V7 929 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 C12orf50Q8NA57 414 aaPredicted RBP10.01□□□□□ -0.81
PRKCH-208ENST00000553846 PRMT7Q9NVM4 692 aaPredicted RBP10.01□□□□□ -0.81
PRKCH-208ENST00000553846 NAP1L2Q9ULW6 460 aaPredicted RBP10.01□□□□□ -0.81
PRKCH-208ENST00000553846 USP20Q9Y2K6 914 aa10.01□□□□□ -0.81
PRKCH-208ENST00000553846 TAF4O00268 1085 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 N4BP3O15049 544 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 RPP40O75818 363 aaKnown RBP10□□□□□ -0.81
PRKCH-208ENST00000553846 RPS6KB1P23443 525 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 AKAP17AQ02040 695 aaKnown RBP10□□□□□ -0.81
PRKCH-208ENST00000553846 TEAD2Q15562 447 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 PLK5Q496M5 336 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 STXBP5Q5T5C0 1151 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 TPGS2Q68CL5 300 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 NCAPH2Q6IBW4 605 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 CEP68Q76N32 757 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 KRT25Q7Z3Z0 450 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 NEK8Q86SG6 692 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 LEMD2Q8NC56 503 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 UROC1Q96N76 676 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 ZMAT2Q96NC0 199 aaKnown RBP10□□□□□ -0.81
PRKCH-208ENST00000553846 EIF2AK1Q9BQI3 630 aaKnown RBP10□□□□□ -0.81
PRKCH-208ENST00000553846 DNAJC25Q9H1X3 360 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 CYP4F11Q9HBI6 524 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 FBXL5Q9UKA1 691 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 PCNX2A6NKB5 2137 aa10□□□□□ -0.81
PRKCH-208ENST00000553846 CFAP46Q8IYW2 2715 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 TSC2P49815 1807 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 TNRC6BQ9UPQ9 1833 aaKnown RBP9.99□□□□□ -0.81
PRKCH-208ENST00000553846 LNP1A1A4G5 178 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 FAM205CA6NFA0 338 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 ACKR2O00590 384 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 PRRG1O14668 218 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 SYN3O14994 580 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 SPATA31C1P0DKV0 1188 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 PXNP49023 591 aaPredicted RBP9.99□□□□□ -0.81
PRKCH-208ENST00000553846 NOVA1P51513 510 aaKnown RBP9.99□□□□□ -0.81
PRKCH-208ENST00000553846 CCT2P78371 535 aaKnown RBP9.99□□□□□ -0.81
PRKCH-208ENST00000553846 ZNF252P-AS1Q0IIN9 211 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 TWF1Q12792 350 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 TOB2Q14106 344 aaPredicted RBP9.99□□□□□ -0.81
PRKCH-208ENST00000553846 TPH2Q8IWU9 490 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 TNFRSF25Q93038 417 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 E2F7Q96AV8 911 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 ZFYVE19Q96K21 471 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 EDEM2Q9BV94 578 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 DUSP15Q9H1R2 295 aaPredicted RBP9.99□□□□□ -0.81
PRKCH-208ENST00000553846 CRISPLD1Q9H336 500 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 VPS45Q9NRW7 570 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 GTSE1Q9NYZ3 720 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 AFF4Q9UHB7 1163 aaKnown RBP9.99□□□□□ -0.81
PRKCH-208ENST00000553846 MAFFQ9ULX9 164 aa9.99□□□□□ -0.81
PRKCH-208ENST00000553846 SNX14Q9Y5W7 946 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms