RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 GSTCDQ8NEC7 633 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 HPDLQ96IR7 371 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 ZNF560Q96MR9 790 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 ZBED2Q9BTP6 218 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 NUP58Q9BVL2 599 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 MTIF3Q9H2K0 278 aaKnown RBP10.51□□□□□ -0.73
CHD8-204ENST00000553622 UBE2TQ9NPD8 197 aaPredicted RBP10.51□□□□□ -0.73
CHD8-204ENST00000553622 NLRC4Q9NPP4 1024 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 TBC1D13Q9NVG8 400 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 KANSL3Q9P2N6 904 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
CHD8-204ENST00000553622 SIX4Q9UIU6 781 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 FHOD1Q9Y613 1164 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 SLC4A7Q9Y6M7 1214 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 ITIH6Q6UXX5 1313 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 PDE4DIPQ5VU43 2346 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 PODXLO00592 558 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 PPEF2O14830 753 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 EPHB6O15197 1021 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 PMM2O15305 246 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 ZC3H11AO75152 810 aaKnown RBP eCLIP10.5□□□□□ -0.73
CHD8-204ENST00000553622 CYP3A5P20815 502 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 USP8P40818 1118 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 MAGEA10P43363 369 aaPredicted RBP10.5□□□□□ -0.73
CHD8-204ENST00000553622 OR1G1P47890 313 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 MCCD1P59942 119 aaPredicted RBP10.5□□□□□ -0.73
CHD8-204ENST00000553622 TNNC1P63316 161 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 CCDC173Q0VFZ6 552 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 TUSC3Q13454 348 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 TRIM14Q14142 442 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 ZBTB6Q15916 424 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 ZNF667Q5HYK9 610 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 KLHDC7AQ5VTJ3 777 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 IQCEQ6IPM2 695 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 ARHGEF19Q8IW93 802 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 TATDN2Q93075 761 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 TOP1MTQ969P6 601 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 CASD1Q96PB1 797 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 SPAG5Q96R06 1193 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 YME1L1Q96TA2 773 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 MRPL9Q9BYD2 267 aaKnown RBP10.5□□□□□ -0.73
CHD8-204ENST00000553622 SIX2Q9NPC8 291 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 CXXC1Q9P0U4 656 aaPredicted RBP10.5□□□□□ -0.73
CHD8-204ENST00000553622 APEX2Q9UBZ4 518 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 DNAJC12Q9UKB3 198 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 COQ4Q9Y3A0 265 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 VWA8A3KMH1 1905 aa10.5□□□□□ -0.73
CHD8-204ENST00000553622 TSC2P49815 1807 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 DDHD2O94830 711 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 ASS1P00966 412 aaKnown RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 GYPCP04921 128 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 P4HA1P13674 534 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 UCHL3P15374 230 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 CASP14P31944 242 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 TAF6P49848 677 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 CLCNKBP51801 687 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 MFAP3P55082 362 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 ADKP55263 362 aaKnown RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 BTG3Q14201 252 aaPredicted RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 WDR72Q3MJ13 1102 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 SV2CQ496J9 727 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 PHLDB3Q6NSJ2 640 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 ZNF280BQ86YH2 543 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 LRRC43Q8N309 656 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 ZNF397Q8NF99 534 aaPredicted RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 LMO3Q8TAP4 145 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 HASPINQ8TF76 798 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 HERVK_113Q902F9 699 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 TAF4BQ92750 862 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 DDX27Q96GQ7 796 aaKnown RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 RNPC3Q96LT9 517 aaKnown RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 MMS19Q96T76 1030 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 PAAF1Q9BRP4 392 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 GANQ9H2C0 597 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 APOBEC3GQ9HC16 384 aaKnown RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 PLCB1Q9NQ66 1216 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 CEP72Q9P209 647 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 HCSTQ9UBK5 93 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 AJAP1Q9UKB5 411 aaPredicted RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 PRG3Q9Y2Y8 225 aaPredicted RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 LUC7L2Q9Y383 392 aaKnown RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 NUB1Q9Y5A7 615 aa10.49□□□□□ -0.73
CHD8-204ENST00000553622 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.49□□□□□ -0.73
CHD8-204ENST00000553622 COL4A6Q14031 1691 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 ANO9A1A5B4 782 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 AKR1B15C9JRZ8 316 aaPredicted RBP10.48□□□□□ -0.73
CHD8-204ENST00000553622 H0YGN5 161 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 PIRO00625 290 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 INPPL1O15357 1258 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 B4GALT3O60512 393 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 DGKIO75912 1065 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 B3GAT3O94766 335 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 NOL4O94818 638 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 KRT5P13647 590 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 ATP2A2P16615 1042 aaKnown RBP10.48□□□□□ -0.73
CHD8-204ENST00000553622 CD58P19256 250 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 LRPAP1P30533 357 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 ATICP31939 592 aa10.48□□□□□ -0.73
CHD8-204ENST00000553622 RPL9P32969 192 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms