RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 KCNQ1P51787 676 aa24.69■■□□□ 1.54
TDP1-206ENST00000553569 PSMD5Q16401 504 aa24.69■■□□□ 1.54
TDP1-206ENST00000553569 AAK1Q2M2I8 961 aa24.69■■□□□ 1.54
TDP1-206ENST00000553569 ZNF658Q5TYW1 1059 aaPredicted RBP24.69■■□□□ 1.54
TDP1-206ENST00000553569 C9orf57Q5W0N0 161 aa24.69■■□□□ 1.54
TDP1-206ENST00000553569 NT5DC4Q86YG4 428 aa24.69■■□□□ 1.54
TDP1-206ENST00000553569 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.69■■□□□ 1.54
TDP1-206ENST00000553569 MAN1B1Q9UKM7 699 aa24.69■■□□□ 1.54
TDP1-206ENST00000553569 ADH1AP07327 375 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 TMEM191BP0C7N4 346 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 EPCAMP16422 314 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 FGFR3P22607 806 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 CYP24A1Q07973 514 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 CAMK4Q16566 473 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 PIK3R5Q8WYR1 880 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 SUSD3Q96L08 255 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 MTMR12Q9C0I1 747 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 RXFP1Q9HBX9 757 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 CLEC1BQ9P126 229 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 SCN1AP35498 2009 aa24.68■■□□□ 1.54
TDP1-206ENST00000553569 PTPRJQ12913 1337 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 DLATP10515 647 aaKnown RBP24.67■■□□□ 1.54
TDP1-206ENST00000553569 PRCPP42785 496 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 CREMQ03060 361 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 KCNC3Q14003 757 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 SURF1Q15526 300 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 LEXMQ3ZCV2 418 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 PPFIBP1Q86W92 1011 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 LNX1Q8TBB1 728 aaPredicted RBP24.67■■□□□ 1.54
TDP1-206ENST00000553569 CACTINQ8WUQ7 758 aaKnown RBP24.67■■□□□ 1.54
TDP1-206ENST00000553569 CASP10Q92851 521 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 CCDC127Q96BQ5 260 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 ASB2Q96Q27 587 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 LMBRD1Q9NUN5 540 aa24.67■■□□□ 1.54
TDP1-206ENST00000553569 ANO9A1A5B4 782 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 BIN1O00499 593 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 CEP135Q66GS9 1140 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 PDXDC1Q6P996 788 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 DSTYKQ6XUX3 929 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 SLC9A9Q8IVB4 645 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 GPR65Q8IYL9 337 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 SLC22A17Q8WUG5 538 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 ANKRD36BP1Q96IX9 119 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 FNBP1Q96RU3 617 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 APOL5Q9BWW9 433 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 DMAC2Q9NW81 257 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 FNIP2Q9P278 1114 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 CD207Q9UJ71 328 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 TRAF3IP3Q9Y228 551 aa24.66■■□□□ 1.54
TDP1-206ENST00000553569 PIRO00625 290 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 SYN3O14994 580 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 ITGB3P05106 788 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 NR2F2P24468 414 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 POLR2BP30876 1174 aaKnown RBP24.65■■□□□ 1.54
TDP1-206ENST00000553569 CLCN4P51793 760 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 PSMD6Q15008 389 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 VARS2Q5ST30 1063 aaKnown RBP24.65■■□□□ 1.54
TDP1-206ENST00000553569 ANKRD54Q6NXT1 300 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 PALB2Q86YC2 1186 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 C1orf127Q8N9H9 656 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 OR5B17Q8NGF7 314 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 MSLNLQ96KJ4 702 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 CGRRF1Q99675 332 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 INTS13Q9NVM9 706 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 PCDHB8Q9UN66 801 aa24.65■■□□□ 1.54
TDP1-206ENST00000553569 SPDYE4A6NLX3 237 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 GOLGA6L22H0YM25 854 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 SPTLC1O15269 473 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 GLUD1P00367 558 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 TNNC2P02585 160 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 KRT19P08727 400 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 TNNI1P19237 187 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 AARSP49588 968 aaKnown RBP eCLIP24.64■■□□□ 1.54
TDP1-206ENST00000553569 CASP4P49662 377 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 LILRA4P59901 499 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 PTCRAQ6ISU1 281 aaPredicted RBP24.64■■□□□ 1.54
TDP1-206ENST00000553569 TMEM184AQ6ZMB5 413 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 ANKS3Q6ZW76 656 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 WDR49Q8IV35 697 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.64■■□□□ 1.54
TDP1-206ENST00000553569 MFSD14AQ96MC6 490 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 ZNF560Q96MR9 790 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 POP1Q99575 1024 aaKnown RBP24.64■■□□□ 1.54
TDP1-206ENST00000553569 CLSTN3Q9BQT9 956 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 GTPBP4Q9BZE4 634 aaKnown RBP24.64■■□□□ 1.54
TDP1-206ENST00000553569 MTRRQ9UBK8 725 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 ITGA11Q9UKX5 1188 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 AGAP1Q9UPQ3 857 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 FRMD4BQ9Y2L6 1034 aa24.64■■□□□ 1.54
TDP1-206ENST00000553569 TIMM13Q9Y5L4 95 aaPredicted RBP24.64■■□□□ 1.54
TDP1-206ENST00000553569 TCF20Q9UGU0 1960 aaKnown RBP24.63■■□□□ 1.53
TDP1-206ENST00000553569 TSC2P49815 1807 aa24.63■■□□□ 1.53
TDP1-206ENST00000553569 ADAM12O43184 909 aa24.63■■□□□ 1.53
TDP1-206ENST00000553569 TAF6P49848 677 aa24.63■■□□□ 1.53
TDP1-206ENST00000553569 ZCWPW2Q504Y3 356 aa24.63■■□□□ 1.53
TDP1-206ENST00000553569 COBLL1Q53SF7 1204 aa24.63■■□□□ 1.53
TDP1-206ENST00000553569 TJAP1Q5JTD0 557 aa24.63■■□□□ 1.53
TDP1-206ENST00000553569 CSGALNACT2Q8N6G5 542 aa24.63■■□□□ 1.53
TDP1-206ENST00000553569 APPL2Q8NEU8 664 aa24.63■■□□□ 1.53
TDP1-206ENST00000553569 CLSTN2Q9H4D0 955 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms