RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RARAP10276 462 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 PIK3CAP42336 1068 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 RPL21P46778 160 aaKnown RBP13.77□□□□□ -0.21
SHMT2-205ENST00000553474 EFNA5P52803 228 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 DRP2Q13474 957 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 SGO2Q562F6 1265 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 TTC19Q6DKK2 380 aaPredicted RBP13.77□□□□□ -0.21
SHMT2-205ENST00000553474 TTC27Q6P3X3 843 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 ZPBP2Q6X784 338 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 CEP128Q6ZU80 1094 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 PHF13Q86YI8 300 aaPredicted RBP13.77□□□□□ -0.21
SHMT2-205ENST00000553474 ZDHHC14Q8IZN3 488 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 ZNF473Q8WTR7 871 aaKnown RBP13.77□□□□□ -0.21
SHMT2-205ENST00000553474 ZNF516Q92618 1163 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 CGRRF1Q99675 332 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 EPB41L4BQ9H329 900 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 RBAKQ9NYW8 714 aaPredicted RBP13.77□□□□□ -0.21
SHMT2-205ENST00000553474 E7EVH7 732 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 IRF6O14896 467 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 MEFVO15553 781 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-205ENST00000553474 PROSCO94903 275 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 GJA5P36382 358 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 MAGOHP61326 146 aaKnown RBP13.76□□□□□ -0.21
SHMT2-205ENST00000553474 HTRA3P83110 453 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
SHMT2-205ENST00000553474 CUL2Q13617 745 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 NEDD9Q14511 834 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 SURF1Q15526 300 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 TDRD10Q5VZ19 366 aaKnown RBP13.76□□□□□ -0.21
SHMT2-205ENST00000553474 FAM160B1Q5W0V3 765 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 RGMBQ6NW40 437 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 MON1BQ7L1V2 547 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 PROCA1Q8NCQ7 364 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-205ENST00000553474 BBOF1Q8ND07 529 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 FAM167AQ96KS9 214 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 IMPG2Q9BZV3 1241 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 ACP6Q9NPH0 428 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 TRIM66O15016 1216 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 ACO1P21399 889 aaKnown RBP13.76□□□□□ -0.21
SHMT2-205ENST00000553474 GLRA2P23416 452 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 COPB2P35606 906 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 CETN2P41208 172 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 SOX10P56693 466 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 PPIL2Q13356 520 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 PPP1R7Q15435 360 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 MFSD5Q6N075 450 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 AADACL2Q6P093 401 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 RASAL3Q86YV0 1011 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 RHOT1Q8IXI2 618 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 ABRAQ8N0Z2 381 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 P3H4Q92791 437 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 MPHOSPH6Q99547 160 aaKnown RBP13.76□□□□□ -0.21
SHMT2-205ENST00000553474 MSTO1Q9BUK6 570 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 MROH7Q68CQ1 1323 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 ADGRA2Q96PE1 1338 aa13.76□□□□□ -0.21
SHMT2-205ENST00000553474 C5orf60A6NFR6 353 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 UNCXA6NJT0 531 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 RIPK2O43353 540 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 LSM8O95777 96 aaKnown RBP13.75□□□□□ -0.21
SHMT2-205ENST00000553474 CLTAP09496 248 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 ATP4AP20648 1035 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 EDNRBP24530 442 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 ATP5DP30049 168 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 MMP13P45452 471 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 NLRP11P59045 1033 aaKnown RBP13.75□□□□□ -0.21
SHMT2-205ENST00000553474 PTK6Q13882 451 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 SLC29A2Q14542 456 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 TARBP2Q15633 366 aaKnown RBP13.75□□□□□ -0.21
SHMT2-205ENST00000553474 KCNV1Q6PIU1 500 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 CRELD2Q6UXH1 353 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-205ENST00000553474 GADL1Q6ZQY3 521 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 TAOK1Q7L7X3 1001 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 RIOX2Q8IUF8 465 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 KATNAL2Q8IYT4 538 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 ANKRD35Q8N283 1001 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 ATL2Q8NHH9 583 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 BBXQ8WY36 941 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-205ENST00000553474 SNF8Q96H20 258 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 PI4K2AQ9BTU6 479 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 FOXP3Q9BZS1 431 aa13.75□□□□□ -0.21
SHMT2-205ENST00000553474 LRRIQ4A6NIV6 560 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 NDC80O14777 642 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 RGS16O15492 202 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-205ENST00000553474 THAP12O43422 761 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 ADCY3O60266 1144 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 RRM1P23921 792 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 GNA15P30679 374 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 ALDH5A1P51649 535 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-205ENST00000553474 NOMO3P69849 1222 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 LMNB2Q03252 620 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 ZNF568Q3ZCX4 644 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 TNFAIP8L3Q5GJ75 292 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 PLEKHA7Q6IQ23 1121 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 CYP4F22Q6NT55 531 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 LBX2Q6XYB7 198 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 WDR49Q8IV35 697 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 OTUD6BQ8N6M0 293 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 EXD1Q8NHP7 514 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 CCHCR1Q8TD31 782 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms