RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 GRM6O15303 877 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 XPOTO43592 962 aaKnown RBP16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 CST3P01034 146 aaPredicted RBP16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 ITGB3P05106 788 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 TNNI1P19237 187 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 GTF2H1P32780 548 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 PPM1AP35813 382 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 GCLMP48507 274 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 ALDH7A1P49419 539 aaKnown RBP16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 ZNF165P49910 485 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 AP3M2P53677 418 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 CBWD6Q4V339 395 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 CBWD3Q5JTY5 395 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 CBWD5Q5RIA9 395 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 LIMS2Q7Z4I7 341 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 AOPEPQ8N6M6 819 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 CACTINQ8WUQ7 758 aaKnown RBP16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 GPR62Q9BZJ7 368 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 CBX8Q9HC52 389 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 AAASQ9NRG9 546 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 ADAM28Q9UKQ2 775 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 PCDHB12Q9Y5F1 795 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 MYO9BQ13459 2157 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 TSC2P49815 1807 aa16.03■□□□□ 0.16
MTHFD1-204ENST00000553405 MYO7AQ13402 2215 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 CARNS1A5YM72 827 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 PMM2O15305 246 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 LRRN2O75325 713 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 FGFR1OPO95684 399 aaKnown RBP16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 TMEM191BP0C7N4 346 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 KRT13P13646 458 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 POLR2BP30876 1174 aaKnown RBP16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 LILRA4P59901 499 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 GRIN2CQ14957 1233 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 MIIPQ5JXC2 388 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 SPOUT1Q5T280 376 aaKnown RBP16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 TAS1R1Q7RTX1 841 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 DDX53Q86TM3 631 aaKnown RBP16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 FBXO22Q8NEZ5 403 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 ARNTL2Q8WYA1 636 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 ANKRD36BP1Q96IX9 119 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 C11orf84Q9BUA3 381 aaPredicted RBP16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 COLEC11Q9BWP8 271 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 TMEM8AQ9HCN3 771 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 LZTS1Q9Y250 596 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 COQ4Q9Y3A0 265 aa16.02■□□□□ 0.16
MTHFD1-204ENST00000553405 EYSQ5T1H1 3165 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 M0QZQ0 153 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 RFXAPO00287 272 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 B3GAT3O94766 335 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 STAU1O95793 577 aaKnown RBP16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 CAVIN2O95810 425 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 TNNC2P02585 160 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 BRCC3P46736 316 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 CCDC40Q4G0X9 1142 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 TIGD5Q53EQ6 642 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 HSP90AA4PQ58FG1 418 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 TCP11X2Q5H9J9 407 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 FUT10Q6P4F1 479 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 LRRC52Q8N7C0 313 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 TAS1R2Q8TE23 839 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 HASPINQ8TF76 798 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 GDPD5Q8WTR4 605 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 SEMA4DQ92854 862 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 SUSD3Q96L08 255 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 NAT10Q9H0A0 1025 aaKnown RBP16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 VRTNQ9H8Y1 702 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 ALG13Q9NP73 1137 aaKnown RBP16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 CHST7Q9NS84 486 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 AGAP1Q9UPQ3 857 aa16.01■□□□□ 0.15
MTHFD1-204ENST00000553405 LRRC10BA6NIK2 292 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 KCNJ18B7U540 433 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 I3L4J1 428 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 FSCN2O14926 492 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 LILRB3O75022 631 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 ATP1A3P13637 1013 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 FGFR3P22607 806 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 EEF1GP26641 437 aaKnown RBP16■□□□□ 0.15
MTHFD1-204ENST00000553405 FMO5P49326 533 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 RBP5P82980 135 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 UBE3AQ05086 875 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 GPM6BQ13491 265 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 ADGRE1Q14246 886 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 KCNJ12Q14500 433 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 KRT39Q6A163 491 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 USP37Q86T82 979 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 LUZP1Q86V48 1076 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 LMO3Q8TAP4 145 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 FAM200AQ8TCP9 573 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 TMEM169Q96HH4 297 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 HERC2P3Q9BVR0 1158 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 ZBP1Q9H171 429 aa16■□□□□ 0.15
MTHFD1-204ENST00000553405 ASS1P00966 412 aaKnown RBP15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 HLA-DRAP01903 254 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 SOD2P04179 222 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 POU3F3P20264 500 aaPredicted RBP15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 MXI1P50539 228 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 ERVFC1P60507 584 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 MYL6P60660 151 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 KCNH2Q12809 1159 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms