RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 FAM171A1Q5VUB5 890 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 KIAA1841Q6NSI8 718 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 TAS1R1Q7RTX1 841 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 RBM23Q86U06 439 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 PPFIBP1Q86W92 1011 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 WDR49Q8IV35 697 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 SMYD4Q8IYR2 804 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 SUSD3Q96L08 255 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 RXFP1Q9HBX9 757 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 PDE11AQ9HCR9 933 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 PRDM6Q9NQX0 595 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 DMAC2Q9NW81 257 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 CLDND1Q9NY35 253 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 FNIP2Q9P278 1114 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 MAN1B1Q9UKM7 699 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 MAPK8IP1Q9UQF2 711 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 NUB1Q9Y5A7 615 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 PTPRDP23468 1912 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 C2CD2LO14523 706 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 SYN3O14994 580 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 LINC01565O15544 149 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 EXOC3O60645 756 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 CLASP2O75122 1294 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 CNPP09543 421 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 TKTP29401 623 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 BRCC3P46736 316 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 NDUFV1P49821 464 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 TFAMQ00059 246 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 STIM1Q13586 685 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 PSMD6Q15008 389 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 PSMD5Q16401 504 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 EDRF1Q3B7T1 1238 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 C9orf57Q5W0N0 161 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 TMEM184AQ6ZMB5 413 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 VN1R2Q8NFZ6 395 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 CACTINQ8WUQ7 758 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 ATXN2LQ8WWM7 1075 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 RIN2Q8WYP3 895 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 B3GALT6Q96L58 329 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 ZNF560Q96MR9 790 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 CGRRF1Q99675 332 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 MTMR12Q9C0I1 747 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 CLSTN2Q9H4D0 955 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 IGFLR1Q9H665 355 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 DPP3Q9NY33 737 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 A0A0C4DFX4 3053 aa12.67□□□□□ -0.38
TRAFD1-209ENST00000552896 PTPRJQ12913 1337 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 M0QZQ0 153 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 PIRO00625 290 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 PSMA7O14818 248 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 PPEF2O14830 753 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 PER2O15055 1255 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 MAPK13O15264 365 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 TEX28O15482 410 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 C1RP00736 705 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 TMEM191BP0C7N4 346 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 KCNA5P22460 613 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 NR2F2P24468 414 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 IGFBP6P24592 240 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 RPL13P26373 211 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 LTBRP36941 435 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 PNPLA4P41247 253 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 PRCPP42785 496 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 MORC3Q14149 939 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 LEXMQ3ZCV2 418 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 ANKS3Q6ZW76 656 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 ADSSL1Q8N142 457 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 TMEM130Q8N3G9 435 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 C1orf127Q8N9H9 656 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 TRIML1Q8N9V2 468 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 CASP10Q92851 521 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 ANKRD36BP1Q96IX9 119 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 MFSD14AQ96MC6 490 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 KLHL5Q96PQ7 755 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 FNBP1Q96RU3 617 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 INTS13Q9NVM9 706 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 DZANK1Q9NVP4 752 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 MTRRQ9UBK8 725 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 FRMD4BQ9Y2L6 1034 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 HCFC2Q9Y5Z7 792 aa12.66□□□□□ -0.38
TRAFD1-209ENST00000552896 ARHGEF37A1IGU5 675 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 I3L4J1 428 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 TNNC2P02585 160 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 ITGB3P05106 788 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 TAF6P49848 677 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 CLCN4P51793 760 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 LILRA4P59901 499 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 MRPS5P82675 430 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 TFF2Q03403 129 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 LRRC63Q05C16 580 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 ENPEPQ07075 957 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 SV2CQ496J9 727 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 CENPPQ6IPU0 288 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 PRSS55Q6UWB4 352 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 CEP57Q86XR8 500 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 LRRC52Q8N7C0 313 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms