RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TRPV5Q9NQA5 729 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 PRMT8Q9NR22 394 aaPredicted RBP12.96□□□□□ -0.33
CKAP4-202ENST00000552828 ZSCAN32Q9NX65 697 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 DNM3Q9UQ16 869 aa12.96□□□□□ -0.33
CKAP4-202ENST00000552828 MRPS17Q9Y2R5 130 aaKnown RBP12.96□□□□□ -0.33
CKAP4-202ENST00000552828 FANCMQ8IYD8 2048 aa12.96□□□□□ -0.34
CKAP4-202ENST00000552828 MYH15Q9Y2K3 1946 aa12.96□□□□□ -0.34
CKAP4-202ENST00000552828 PRRG1O14668 218 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 ZNF197O14709 1029 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 HIP1RO75146 1068 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 PDIA4P13667 645 aaKnown RBP12.95□□□□□ -0.34
CKAP4-202ENST00000552828 OSTNP61366 133 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 ADCY1Q08828 1119 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 MAPK7Q13164 816 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 DMP1Q13316 513 aaPredicted RBP12.95□□□□□ -0.34
CKAP4-202ENST00000552828 FAM78AQ5JUQ0 283 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 RINT1Q6NUQ1 792 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 MPZL3Q6UWV2 235 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 C1orf186Q6ZWK4 172 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 BRAPQ7Z569 592 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 GPR161Q8N6U8 529 aaKnown RBP12.95□□□□□ -0.34
CKAP4-202ENST00000552828 SNX29Q8TEQ0 813 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 ATRIPQ8WXE1 791 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 TCEAL4Q96EI5 215 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 SUSD3Q96L08 255 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 DRC1Q96MC2 740 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 HINFPQ9BQA5 517 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 CORO1BQ9BR76 489 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 TARS2Q9BW92 718 aaKnown RBP12.95□□□□□ -0.34
CKAP4-202ENST00000552828 FAM126AQ9BYI3 521 aaPredicted RBP12.95□□□□□ -0.34
CKAP4-202ENST00000552828 RAB34Q9BZG1 259 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 EPC1Q9H2F5 836 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 TRPV4Q9HBA0 871 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 CYP4F11Q9HBI6 524 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 KMT5AQ9NQR1 393 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 HEBP1Q9NRV9 189 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 FBXL5Q9UKA1 691 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 INSL5Q9Y5Q6 135 aa12.95□□□□□ -0.34
CKAP4-202ENST00000552828 MED19A0JLT2 244 aaPredicted RBP12.94□□□□□ -0.34
CKAP4-202ENST00000552828 E9PMD0 336 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 LAD1O00515 517 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 MAN2B1O00754 1011 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 STX6O43752 255 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 CCR2P41597 374 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 EPHA5P54756 1037 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 PTGDRQ13258 359 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 BECN1Q14457 450 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 NBR1Q14596 966 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 IL17AQ16552 155 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 MAP4K3Q8IVH8 894 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 SPIRE2Q8WWL2 714 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 SMARCD2Q92925 531 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 C18orf25Q96B23 403 aaPredicted RBP12.94□□□□□ -0.34
CKAP4-202ENST00000552828 ASB16Q96NS5 453 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 RUSC1Q9BVN2 902 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 TIPINQ9BVW5 301 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 ZFP14Q9HCL3 533 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 AFF4Q9UHB7 1163 aaKnown RBP12.94□□□□□ -0.34
CKAP4-202ENST00000552828 KCNG1Q9UIX4 513 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 PCDHB6Q9Y5E3 794 aa12.94□□□□□ -0.34
CKAP4-202ENST00000552828 NRG2O14511 850 aaPredicted RBP12.93□□□□□ -0.34
CKAP4-202ENST00000552828 MOSPD3O75425 235 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 TOM1L1O75674 476 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 TDGF1P13385 188 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 GUCY2CP25092 1073 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 PRPHP41219 470 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 MLLT6P55198 1093 aaPredicted RBP12.93□□□□□ -0.34
CKAP4-202ENST00000552828 MTAPQ13126 283 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 SLC10A6Q3KNW5 377 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 CTXN3Q4LDR2 81 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 CYP4A22Q5TCH4 519 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 KRT79Q5XKE5 535 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 ZNF280DQ6N043 979 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 PDZD4Q76G19 769 aaPredicted RBP12.93□□□□□ -0.34
CKAP4-202ENST00000552828 KCTD17Q8N5Z5 321 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 LEMD2Q8NC56 503 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 APPL2Q8NEU8 664 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 BEST2Q8NFU1 509 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 IRF7Q92985 503 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 ZSWIM3Q96MP5 696 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 TCHPQ9BT92 498 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 IER2Q9BTL4 223 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 MMTAG2Q9BU76 263 aaKnown RBP12.93□□□□□ -0.34
CKAP4-202ENST00000552828 TRMT61BQ9BVS5 477 aaKnown RBP12.93□□□□□ -0.34
CKAP4-202ENST00000552828 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.93□□□□□ -0.34
CKAP4-202ENST00000552828 CEP72Q9P209 647 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 MTMR6Q9Y217 621 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 NUB1Q9Y5A7 615 aa12.93□□□□□ -0.34
CKAP4-202ENST00000552828 PP2D1A8MPX8 630 aa12.92□□□□□ -0.34
CKAP4-202ENST00000552828 M0QZQ0 153 aa12.92□□□□□ -0.34
CKAP4-202ENST00000552828 SLC16A4O15374 487 aa12.92□□□□□ -0.34
CKAP4-202ENST00000552828 OAZ2O95190 189 aa12.92□□□□□ -0.34
CKAP4-202ENST00000552828 MAPTP10636 758 aaKnown RBP12.92□□□□□ -0.34
CKAP4-202ENST00000552828 PSMC3P17980 439 aa12.92□□□□□ -0.34
CKAP4-202ENST00000552828 SDHBP21912 280 aa12.92□□□□□ -0.34
CKAP4-202ENST00000552828 TGM1P22735 817 aa12.92□□□□□ -0.34
CKAP4-202ENST00000552828 ARPP19P56211 112 aa12.92□□□□□ -0.34
CKAP4-202ENST00000552828 MCL1Q07820 350 aa12.92□□□□□ -0.34
CKAP4-202ENST00000552828 RSPO4Q2I0M5 234 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms