RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 TSEN2Q8NCE0 465 aaKnown RBP11.42□□□□□ -0.58
TGFBR1-209ENST00000552516 TMEM8AQ9HCN3 771 aa11.42□□□□□ -0.58
TGFBR1-209ENST00000552516 SNTG2Q9NY99 539 aa11.42□□□□□ -0.58
TGFBR1-209ENST00000552516 LMO7Q8WWI1 1683 aa11.42□□□□□ -0.58
TGFBR1-209ENST00000552516 SETD1AO15047 1707 aaKnown RBP11.42□□□□□ -0.58
TGFBR1-209ENST00000552516 NFKBIEO00221 500 aa11.42□□□□□ -0.58
TGFBR1-209ENST00000552516 PYGMP11217 842 aa11.42□□□□□ -0.58
TGFBR1-209ENST00000552516 FAM71DQ8N9W8 422 aa11.42□□□□□ -0.58
TGFBR1-209ENST00000552516 PORCNQ9H237 461 aa11.42□□□□□ -0.58
TGFBR1-209ENST00000552516 NDC80O14777 642 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 CPP00450 1065 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 ETS1P14921 441 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 ORC2Q13416 577 aaPredicted RBP11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 SLC12A1Q13621 1099 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 TMEM132DQ14C87 1099 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 MYLK4Q86YV6 388 aaPredicted RBP11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 HPDLQ96IR7 371 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 SMC6Q96SB8 1091 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 CHMP2BQ9UQN3 213 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 CASTOR2A6NHX0 329 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 FAM83AQ86UY5 434 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 GRK7Q8WTQ7 553 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 MAML1Q92585 1016 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 PRMT1Q99873 361 aaKnown RBP11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 HSD17B14Q9BPX1 270 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 HOMER3Q9NSC5 361 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 BRAFP15056 766 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 SDC4P31431 198 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 GTF2A1P52655 376 aaPredicted RBP11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 DCAF6Q58WW2 860 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 EMBQ6PCB8 327 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 P3H4Q92791 437 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 RANBP17Q9H2T7 1088 aaKnown RBP11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 CACNA1FO60840 1977 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 KCNN4O15554 427 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 PGK1P00558 417 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 MSH2P43246 934 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 ANKRD20A3Q5VUR7 823 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 SEMA4DQ92854 862 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 MKL1Q969V6 931 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 TOPAZ1Q8N9V7 1692 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 POMCP01189 267 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 ARL4AP40617 200 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 ALDH5A1P51649 535 aaPredicted RBP11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 FASTKD5Q7L8L6 764 aaKnown RBP11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 KIAA0319LQ8IZA0 1049 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 SMARCAD1Q9H4L7 1026 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 ADARB2Q9NS39 739 aaKnown RBP11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 UBP1Q9NZI7 540 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 VAV3Q9UKW4 847 aa11.41□□□□□ -0.58
TGFBR1-209ENST00000552516 MYH13Q9UKX3 1938 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 H3BRB1 525 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 H2AFXP16104 143 aaPredicted RBP11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 ACTN3Q08043 901 aaPredicted RBP11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 LRRC8CQ8TDW0 803 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 SKA2Q8WVK7 121 aaPredicted RBP11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 BAP1Q92560 729 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 OSBPL8Q9BZF1 889 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 TUT1Q9H6E5 874 aaKnown RBP11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 UMODL1Q5DID0 1318 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 SYNGAP1Q96PV0 1343 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 SLC16A3O15427 465 aaKnown RBP11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 BANF1O75531 89 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 CUL2Q13617 745 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 HIBCHQ6NVY1 386 aaPredicted RBP11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 SCUBE3Q8IX30 993 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 SPATA20Q8TB22 786 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 LNX1Q8TBB1 728 aaPredicted RBP11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 SCFD2Q8WU76 684 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 JPH2Q9BR39 696 aaPredicted RBP11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 CISHQ9NSE2 258 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 ARHGAP42A6NI28 874 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 STK10O94804 968 aaKnown RBP11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 ENDOD1O94919 500 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 TNFAIP2Q03169 654 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 CYP24A1Q07973 514 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 ALCAMQ13740 583 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 ERO1BQ86YB8 467 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 MAP7D3Q8IWC1 876 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 C12orf29Q8N999 325 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 ERAP1Q9NZ08 941 aa11.4□□□□□ -0.58
TGFBR1-209ENST00000552516 FAM237AA0A1B0GTK4 181 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 BAG2O95816 211 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 STAG3L1P0CL83 205 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 ITGA8P53708 1063 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 ATXN3P54252 364 aaPredicted RBP11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 TGFB2P61812 414 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 TMEM63BQ5T3F8 832 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 EEF1DP3Q658K8 133 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 FAM131BQ86XD5 332 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 RHOT1Q8IXI2 618 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 PARD3BQ8TEW8 1205 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 ATP8B4Q8TF62 1192 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 MCUR1Q96AQ8 359 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 KCTD10Q9H3F6 313 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 GOLGA2P5Q9HBQ8 144 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 RAB6BQ9NRW1 208 aa11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 KLHL8Q9P2G9 620 aaPredicted RBP11.4□□□□□ -0.59
TGFBR1-209ENST00000552516 EXTL3O43909 919 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms